Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05254 ATGGCCTCCCTTGAAGCTAGAACTAATGGAATTTCCAATAACCATATTGAGATCCCTATCCATGCCAATGGTGTGGAGCCAAAACCAAGCCAAGGGGTTGAAGAGATTGATTACTCTCAAAGGGGTCAGTGGCTTAGAGCAGCAGTGTTGGGAGCCAATGATGGGTTAGTGTCAGTTGCATCACTGATGATGGGTGTTGGAGCTGTGAAGGAAGACATAAGTGCCATGCTTCTAGCTGGTTTTGCTGGCTTAGTAGCTGGTGCTTGTAGTATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAATATGACATTGAGATGGCTCTGATTAAAAGACAGAGTGAAACTAATAATAATAATGAAGAAGCTCAAAGGGAGAAGCTTCCAAACCCATTTCAGGCTGCACTTGCATCAGCACTTGCATTTTCTGTGGGTGCTTTGGTGCCACTGCTAGCTGCTGTGTTTATAAGGAATCACAAGATAAGGATGGGTGTTGTTGCTGCTGTGGCTAGCTTGGCTTTGTTGGTGTTTGGAGGGGTTGGAGCAGTGCTTGGAAACACTCCAGTGAGGAGATCTTGTGTTAGGGTGCTCATTGGAGGTTGGATGGCTATGGCCATAACATTTGGTCTCACCAAATTGATTGGCTCCTCTGGAATTTAA 660 0.4545 MASLEARTNGISNNHIEIPIHANGVEPKPSQGVEEIDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKEDISAMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEMALIKRQSETNNNNEEAQREKLPNPFQAALASALAFSVGALVPLLAAVFIRNHKIRMGVVAAVASLALLVFGGVGAVLGNTPVRRSCVRVLIGGWMAMAITFGLTKLIGSSGI. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05254 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 35 214 IPR008217 GO:0005384|GO:0030026
Seca12g05254 219 Pfam VIT family 45 126 IPR008217 GO:0005384|GO:0030026
Seca12g05254 219 Pfam VIT family 125 211 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05254 Seca-Chr12 141350104 141350763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05254 36 219 Nodulin-like Gene Family AT3G43660 68.478 3.63e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05254 K22736 - gmx:100802489 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05254 12 141350104 141350763 Seca12g05254 12 141350104 141350763 ECH