Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05253 ATGGCAGCTGGTGAACCCAATAATAATGATTCAGTGACACTCAACAACCATGTGGTAGTTACAGTTCCAAATGGAAAGGAACATCATGAGAAGCAAACCCAAGTGACTGAAGATGATACCAATAACATTAACTACTGGCAAAGGGCTCAATGGCTTCGTGCAGCTATGTTAGGAGCCAATGATGGGTTGGTTTCAGTTGCTTCATTGATGATGGGTGTAGGAGCTGTTAAAAGAGATGTCAAATCCATGCTACTTGCTGGTTTTGCAGGGTTAGTTGCAGGGGCTTGTGGCATGTCAATAGGAGAATTTGTTTCTGTGTACACTCAGTATGAAGTTGAGGTTGGTCAAATGAAGAGAGACTTGGATATGAGTAATAGAGGAGAGAAAGAGTTGGAGTTGGAGTTGGAGAAAAGGAAATCATTGCCTAATCCATTGCAAGCTGCTCTGGCATCTGCACTCTCTTTTGCTATAGGTGGTTTGGTTCCTTTACTTTCAGCATCATTCATAACAGATTATAAGATAAGGCTTGTTATGCTTGTGGCAATTTCTGGCTTGGCTTTGGTGGTCTTTGGAAGTGTGGGAGCTCAACTTGGAAAGACACCAAAGCTTAAATCTTGCATTAGGTTTCTTTTTGGGGGATGGATGGCTATGGCTATCACTTTTGGGTTAACCAAATTACTTGAGCTTAGTGGTTTGCAATTATGA 705 0.417 MAAGEPNNNDSVTLNNHVVVTVPNGKEHHEKQTQVTEDDTNNINYWQRAQWLRAAMLGANDGLVSVASLMMGVGAVKRDVKSMLLAGFAGLVAGACGMSIGEFVSVYTQYEVEVGQMKRDLDMSNRGEKELELELEKRKSLPNPLQAALASALSFAIGGLVPLLSASFITDYKIRLVMLVAISGLALVVFGSVGAQLGKTPKLKSCIRFLFGGWMAMAITFGLTKLLELSGLQL. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05253 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 228 IPR008217 GO:0005384|GO:0030026
Seca12g05253 234 CDD Nodulin-21 50 202 - -
Seca12g05253 234 Pfam VIT family 130 224 IPR008217 GO:0005384|GO:0030026
Seca12g05253 234 Pfam VIT family 52 133 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05253 Seca-Chr12 141318269 141318973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05253 37 232 Nodulin-like Gene Family AT3G43660 59.694 2.21e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05253 K22736 - gmx:100791523 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05253 12 141318269 141318973 Seca12g05253 12 141318269 141318973 ECH