Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05248 ATGGCCTCCCTTGAAGCTAGAACTAATGGAAATTCCAATAACCATATTGAGATCCCTATCCATACCAATGGTGTGGAGCCAAAACCAAGCCAAGGGGTTGAAGAGATTGACTACTCTCAAAGGGGTCAGTGGCTTAGAGCTGCTGTATTGGGAGCCAATGATGGGTTAGTGTCAGTTGCATCACTGATGATGGGTGTTGGAGCTGTGAAGGAAGACATAAGTGCCATGCTTCTAGCTGGTTTTGCTGGCTTAGTAGCTGGTGCTTGTAGTATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAGTATGACATTGAGATGGCTCAGATTAAAAGACAGAGTGAAACTAATAATAATAATGATGATGAAGAAGCTCAAAGGGAGAAGCTTCCAAACCCATTCCAGGCTGCACTTGCATCAGCACTTGCATTTTCTGTGGGTGCTCTGGTGCCACTGCTAGCTGCTGTTTTTATAAAGAATCACAAGATAAGGATGGGTGTTGTTGCTGCTGTGGCTAGCTTGGCTTTGTTGGTGTTTGGAGGGGTTGGTGCAGTGATTGGAAAAACTCCAGTGAGGAGATCTTGTGTTAGGGTGTTGATTGGAGGTTGGATGGCTATGGCCATAACATTTGGCCTCACCAAATTGATTGGCTCCTCTGGAATTTAA 666 0.4505 MASLEARTNGNSNNHIEIPIHTNGVEPKPSQGVEEIDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKEDISAMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEMAQIKRQSETNNNNDDEEAQREKLPNPFQAALASALAFSVGALVPLLAAVFIKNHKIRMGVVAAVASLALLVFGGVGAVIGKTPVRRSCVRVLIGGWMAMAITFGLTKLIGSSGI. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05248 221 MobiDBLite consensus disorder prediction 1 29 - -
Seca12g05248 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 216 IPR008217 GO:0005384|GO:0030026
Seca12g05248 221 Pfam VIT family 45 126 IPR008217 GO:0005384|GO:0030026
Seca12g05248 221 Pfam VIT family 127 213 IPR008217 GO:0005384|GO:0030026
Seca12g05248 221 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05248 Seca-Chr12 141254637 141255302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05248 36 221 Nodulin-like Gene Family AT3G43660 68.817 9.81e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05248 K22736 - gmx:100802489 335.495