Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05231 ATGGATTTGAACAAGAAAGCTGTACTGTCTCCTCATGATGCTGAACTTAGGATTGGTGATACTACATTAAGCTTGAATGGCTTTGGCTTTGGAGAAACCAATGATACTAGTTATAGATGTACTGAGAGCAATCTTGGGATGAAGTTTTCCAATGCTTCTGATGATGGCTGCAGATTGGTTCTGGGACTAGGCCCAACCCCAATGGCATATGGCGATGACTACCACAATTTGGGGTTTAATAAGAAGAAAAAGTCATCCAACCTTTTTCCTCAGCATGTGCCATCTGAATGTGAATCAATTCTTCAGCTTGGTCTTTCTGGTGCAACAAATGAGGCTTCAAGTGTACTGGACTACTCAGGTTCAACTGAGACTGATGTGAATATGTCATGTTTCTCAAGCCAAACATCTGCAGAAAATAATTATCCAATGATTCCTGTTGTTGATGAGGGTTCTACCTCAGCAAAGAAATCAGGTGGCTATATGCCTTCACTTCTTTTAGCTCCACGAATGGAGGATAATGCTAAAATATCAGAGCAGACACAAGAACTAATTCTTGGAACAAAGCCTCAACTGTGCTCAGAACCGTCCAGTGCTACAAATTACTCACTTGACACCGCACATGAGCCCCAGGCTACAGGGATAACTTCAGAGAACCGAACAGGCAATACTAAGAGATGTAGATTTTTAGGCTGTACAAAGGGAGCTCGAGGTGCTTCAGGGCTTTGTATTGGACATGGGGGTGGACAGAGATGTCAGAAACCAGGATGCAACAAGGGTGCTGAGAGCCGTACTGCTTATTGTAAGGCCCATGGTGGAGGGAAGAGGTGCCAATACTTAGGGTGTACCAAAAGTGCTGAGGGGAAGACAGATAATTGCATTGCACACGGTGGTGGCAGGCGATGTGGGTATCCAGGTGGGTGCACTAAAGCTGCACGAGGTAAGTCAGGACTTTGCATTAGGCATGGAGGGGGTAAGAGATGCAGGATAGAAGGTTGCACCCGGAGTGCTGAAGGGCAGGCTGGGTTGTGCATCTCTCACGGGGGTGGACGCCGTTGTCAGTACCATGGATGCACAAAGGGCGCACAAGGGAGCACTATGTTTTGCAAGGCTCATGGTGGTGGAAAGCGTTGCTCGTTTGCAGGGTGTACTAAAGGTGCTGAAGGAAGCACCCCACTGTGCAAGGCACATGGTGGGGGGAAGCGTTGCCTTTTCAATGGTGGTGGCATTTGCCCAAAAAGTGTACATGGAGGCACAAACTTTTGTGTTGCTCATGGTGGTGGAAAGAGGTGTGCTGTTGCAGGTTGCACCAAGAGTGCACGTGGCCGTACTGATTGTTGTGTTAGGCATGGTGGCGGGAAGCGGTGCAAGTTTGAAGGATGTGGGAAGAGTGCACAGGGGAGCACAGATTTCTGCAAGGCCCATGGTGGAGGAAAACGGTGTAGTTGGGGAGATGGGAAGTGTGAGAAATTTGCCAGGGGAAAAAGTGGGCTCTGTGCTGCTCACTGTAGCTTGGTGCATGAACGGGAAATGAACAAGGGAAGTCTGATTGCACCTGGTCTTTTCCGTGGTCTTGTACCTGCTGCTTCCACTGCCTGTAGCAGTTTTGAGAACAATTCTTCCTCAGGTGTAAGTGTTGTGTCTGACTCCTATGATTCTATGGAAACACCACCAGCTAAAAGACAGCAACTTATACCCAAGGAGGTGTTAGTTCCACTCTCAATGAAATCACCATCTTATTCAAACTTCTTGACTGCCAAGAAGCCAGATCAAGACAGAAACTGCCACAGCAACGCAGCTGGCTGCAGCAGTGCTCGGAAAGGCACCGACTTTAATCTGCCGGAGGGCAGGGTGCACGGTGGCGACCTCATGTTGTTCTTTGGAGGGAATCTCAAAAATGCACTTGATGGTATCTGA 1914 0.4812 MDLNKKAVLSPHDAELRIGDTTLSLNGFGFGETNDTSYRCTESNLGMKFSNASDDGCRLVLGLGPTPMAYGDDYHNLGFNKKKKSSNLFPQHVPSECESILQLGLSGATNEASSVLDYSGSTETDVNMSCFSSQTSAENNYPMIPVVDEGSTSAKKSGGYMPSLLLAPRMEDNAKISEQTQELILGTKPQLCSEPSSATNYSLDTAHEPQATGITSENRTGNTKRCRFLGCTKGARGASGLCIGHGGGQRCQKPGCNKGAESRTAYCKAHGGGKRCQYLGCTKSAEGKTDNCIAHGGGRRCGYPGGCTKAARGKSGLCIRHGGGKRCRIEGCTRSAEGQAGLCISHGGGRRCQYHGCTKGAQGSTMFCKAHGGGKRCSFAGCTKGAEGSTPLCKAHGGGKRCLFNGGGICPKSVHGGTNFCVAHGGGKRCAVAGCTKSARGRTDCCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGDGKCEKFARGKSGLCAAHCSLVHEREMNKGSLIAPGLFRGLVPAASTACSSFENNSSSGVSVVSDSYDSMETPPAKRQQLIPKEVLVPLSMKSPSYSNFLTAKKPDQDRNCHSNAAGCSSARKGTDFNLPEGRVHGGDLMLFFGGNLKNALDGI. 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05231 637 PANTHER EMB|CAB89363.1 48 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05231 Seca-Chr12 141101379 141106931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05231 350 501 WRKY Transcription Factor Family AT4G12020 57.895 1.75e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05231 - - gmx:100806841 1164.44