Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g05227 | ATGGGAAACATCGAGCGAGTAGTTTCATCTTTCATGGGTTCGTTTAGTCTTTGGGCAATTTTGGTCCTTAAGGTTTCTGGTAATGGCAATGCAGAAAGTGATGCCCTGAATGCATTGAAGACCAACTTGTTTGATCCTAACAGGTTTCTTCAAAGCTGGGATCCTACTCTTGTCAATCCTTGCACATGGTTGCATGTTACTTGCAACAGTGATGAAAGCGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTGGTTTCACAGCTTGGTCTGCTCCCAAATTTGCAACACTTGAAACTTTATAATAATAATATAACTGGGAAAATCCCAAATGAGCTTGGAAATCTGACAAATTTGGTGAGCTTGGATCTTTACTTGAACAAGTTAACAGGTTCCATTCCGGACACATTGGGCAACCTTAAAAAACTACGTGTCCTCATTCATAATTTTGCTTTCCCACAGAATATGGAGGCAGCTTATGCAGCCTATAATAAAACTATTTCAGTTCCAACAGAGGCTGTAGTATACTTAGAAGTTAGAACACGTTTGGCAAAATTGGGTCACAAGTCTGATGACAAAGGGGGTGAGGGGGGGAACATTTTCACCACATTATATGCAGATTTCCAAAGAGGCATGTATCAGTCATGCCTGGATTTAGACATTTTTTTCAATTGTGGCCAATTCACATTGCCAAGTAGAACTATTTGTTATCTATCCTGGCGTCTCAACAATAACAGCTTGTCAGGAAACATTCCTATGTCTTTGACCACTGTCGCTTCACTGCAAGTCCTTGATTTGTCAAACAACAACTTAACAGGAGACGTCCCAGTCAATGGTTCATTTACATTATTTACTCCAGACAGTTTTAACAGTAATCCTCACTTGAATAAAAGATTCATTCCAGCTCCATTGCAACAAACTACTTCAGGTGACTTTGCTACTGGAACCATTGCTGTGGTTTTTGCATTATTGTTTGTAGCCCCTGCAGTTGCACTTGCTTGTTGGCAAATAAGGAAACCACATGATCATTTCATTGATTCTCTTGATGAGGAGGATCCTGATCCTGAACTTTACCTTAGTCAGCTCAAAAGGTTTTCACTGCATGAGCTACGAAGTGCAACAAATAACTTCAAAAATATTCTGGGTAAAGGTGGATCTGGCATGGTTTATAAAGGACACTTAGCAGATGGTTCTCTTGTAGCAGTCAAAAGACTTAAAAAAAAAGGTACCCGAGGTGGGGAACTGCAATTTAAAACTGAAGTTGAAATGATTGGCATGGCTGTGCATCAAAATTTACTTCGGCTGCGTGGTTTTTGCATGACGCGCTCTGAAATGTTGCTTGTGTATCCTCTCTTGATTAATGGAAGTGTAGCATCATGGTTACGAGAGCGTCCAGAATCACAACCACCACTTGACTGGCCAACACGGAAGCGTGTTGCCTTAGGAACTGCTAGGGGGCTTGCTTATTTGCATGATCACTGTCACCCGAAGATTGTTCATCGAGATGTCAAAGCTGCTAATATTTTGTTAGATGAGGAATGTAATGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTTAAGGATTACAAAGATACTCATGTCACCACTGCTGTATATGGTACAATTGGGCATATAGCGCCAGAGTACTACTCAACTGGAAAGTTTACAGAGAAGGTTGATGTTTTTGGATATGGTGTGATGCTTCTTGAAGTAATAACTGGACAGACAGCTTTTGATCTAGCACGACTTGCTGACAATGATGATGCCAGGTTGCTTCTTTGGGTGAAAGGACTTCTGAAAGAGGAGAGGTTGGAGACATTGGTGGATGCAAATTTACAGGGAAAATATAATGAGGAGGAGGTAAAGCAGATAATCCAAGTGGCCTTGCTATGCACACAAGACTCCCCTTTGGAAAGGCCCAAGATGTCTGAGGTGGTTAGAATGCTAGAGGGTGATGGTTTGGCAGAAAAATGGGATCAATGGCAGAAAGAGGAGATTATCCGACAAGATTTCAACCTCAACTTCACCAAATTACTAAATGCTAATTGGATATTAGACTCAATTTCAAATGTCCCACCAGATGAACTATCTTTATCAGGTCCTAGATGA | 2118 | 0.4103 | MGNIERVVSSFMGSFSLWAILVLKVSGNGNAESDALNALKTNLFDPNRFLQSWDPTLVNPCTWLHVTCNSDESVTRVDLGNANLSGQLVSQLGLLPNLQHLKLYNNNITGKIPNELGNLTNLVSLDLYLNKLTGSIPDTLGNLKKLRVLIHNFAFPQNMEAAYAAYNKTISVPTEAVVYLEVRTRLAKLGHKSDDKGGEGGNIFTTLYADFQRGMYQSCLDLDIFFNCGQFTLPSRTICYLSWRLNNNSLSGNIPMSLTTVASLQVLDLSNNNLTGDVPVNGSFTLFTPDSFNSNPHLNKRFIPAPLQQTTSGDFATGTIAVVFALLFVAPAVALACWQIRKPHDHFIDSLDEEDPDPELYLSQLKRFSLHELRSATNNFKNILGKGGSGMVYKGHLADGSLVAVKRLKKKGTRGGELQFKTEVEMIGMAVHQNLLRLRGFCMTRSEMLLVYPLLINGSVASWLRERPESQPPLDWPTRKRVALGTARGLAYLHDHCHPKIVHRDVKAANILLDEECNAVVGDFGLAKLKDYKDTHVTTAVYGTIGHIAPEYYSTGKFTEKVDVFGYGVMLLEVITGQTAFDLARLADNDDARLLLWVKGLLKEERLETLVDANLQGKYNEEEVKQIIQVALLCTQDSPLERPKMSEVVRMLEGDGLAEKWDQWQKEEIIRQDFNLNFTKLLNANWILDSISNVPPDELSLSGPR. | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g05227 | 705 | Gene3D | Transferase(Phosphotransferase) domain 1 | 455 | 672 | - | - | |
Seca12g05227 | 705 | Gene3D | Ribonuclease Inhibitor | 29 | 305 | IPR032675 | - | |
Seca12g05227 | 705 | FunFam | Somatic embryogenesis receptor kinase 1 | 28 | 155 | - | - | |
Seca12g05227 | 705 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 501 | 513 | IPR008271 | GO:0004672|GO:0006468 | |
Seca12g05227 | 705 | SMART | serkin_6 | 378 | 652 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g05227 | 705 | ProSiteProfiles | Protein kinase domain profile. | 378 | 657 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g05227 | 705 | Pfam | Protein tyrosine and serine/threonine kinase | 380 | 652 | IPR001245 | GO:0004672|GO:0006468 | |
Seca12g05227 | 705 | SUPERFAMILY | L domain-like | 32 | 295 | - | - | |
Seca12g05227 | 705 | ProSitePatterns | Protein kinases ATP-binding region signature. | 384 | 406 | IPR017441 | GO:0005524 | |
Seca12g05227 | 705 | Pfam | Leucine rich repeat N-terminal domain | 30 | 69 | IPR013210 | - | |
Seca12g05227 | 705 | ProSiteProfiles | Leucine-rich repeat profile. | 97 | 120 | IPR001611 | GO:0005515 | |
Seca12g05227 | 705 | Gene3D | Phosphorylase Kinase; domain 1 | 350 | 453 | - | - | |
Seca12g05227 | 705 | FunFam | Somatic embryogenesis receptor kinase 1 | 347 | 454 | - | - | |
Seca12g05227 | 705 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 18 | 662 | - | - | |
Seca12g05227 | 705 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 455 | 672 | - | - | |
Seca12g05227 | 705 | SUPERFAMILY | Protein kinase-like (PK-like) | 359 | 653 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g05227 | Seca-Chr12 | 141031470 | 141038310 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g05227 | 17 | 705 | Receptor kinase-like Gene Family | AT4G33430 | 61.790 | 0.0 | 797 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Seca12g05227 | PK_Tyr_Ser-Thr | 6.3e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g05227 | K13416 | K13418 | nnu:104600033 | 646.351 |