Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05218 ATGGAGGGTGGATTTTATGGCAAAAGGTCATTTCTAGTTTTTGTTTCGGTAGTAATTGTTTTGGCTGTAGGGGTGGTGCATGGCGGAGACACGCGTGTGGGGTTCTATTCAAGTACATGTCCACGAGCTGAATCGATTGTTAAGTCCACAATTAAATCCCACGTTAAATCTGATCCAACTTTAGGTGCTGGGTTGCTTAGGATGCACTTCCATGATTGCTTTGTGGAAGGTTGTGATGGGTCGGTTCTCATTGTTGGGTCTGACACTGAGAGAACAGCATCTCCAAACCTTAGCTTGAGAGGATTTGAGGTTATTGATGATGCAAAGACACTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCTCGTGATTCCGTTGTTCTGCTTGGTGGGCCAAGTTGGAAAGTGCCTACTGGACGGAGAGATGGGCGAGTCTCAAAAGCTTCAGATGTGAATTTGCCTGGCCCTGGTGACTCTGTTGATGTGCAGAAACAGAAGTTTGCAGCAAAGGGCCTCAACACTCAAGACCTTGTCGCCCTTGTGGGTGGACATACCATTGGTACTGCAGCTTGTGCAGTACCAATTACAACTTCACTATACAACTTCACTAGAAATGGTCCTGACCCTTCCATTGATCCTTCATTTCTTCCCCAATTACAAGCACTTTGCCCGCAAAACAATGGAGGTTCGAACCGAGTGGCGCTAGATGATGGTAGCCAAAACAAATTTGATACATCTTACTTTTATAATCTGAGGAAGGGCAGGGGAATCCTGCAGTCTGATCAGGCACTGTGGAATGATGATGATTACAAAGGCCATTGTGCAGAGGTACTTGGTTGGATTGACATTCAATGTGGAATTTGGAAAATCTATGGTGAAGATGAGCAACATTGGGGTGAAGACGGGGACTGA 912 0.4583 MEGGFYGKRSFLVFVSVVIVLAVGVVHGGDTRVGFYSSTCPRAESIVKSTIKSHVKSDPTLGAGLLRMHFHDCFVEGCDGSVLIVGSDTERTASPNLSLRGFEVIDDAKTLVSCADILALAARDSVVLLGGPSWKVPTGRRDGRVSKASDVNLPGPGDSVDVQKQKFAAKGLNTQDLVALVGGHTIGTAACAVPITTSLYNFTRNGPDPSIDPSFLPQLQALCPQNNGGSNRVALDDGSQNKFDTSYFYNLRKGRGILQSDQALWNDDDYKGHCAEVLGWIDIQCGIWKIYGEDEQHWGEDGD. 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05218 303 Gene3D - 35 153 - -
Seca12g05218 303 PANTHER PEROXIDASE 25-RELATED 18 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 ProSiteProfiles Plant heme peroxidase family profile. 30 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 Pfam Peroxidase 47 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 FunFam Peroxidase 154 284 - -
Seca12g05218 303 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Seca12g05218 303 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 Gene3D Peroxidase, domain 2 154 269 - -
Seca12g05218 303 SUPERFAMILY Heme-dependent peroxidases 32 272 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca12g05218 303 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Seca12g05218 303 CDD secretory_peroxidase 32 269 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05218 Seca-Chr12 140931034 140933233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05218 9 267 Peroxidase AT5G64120 59.206 5.15e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05218 K00430 - gmx:100783523 385.185