Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05204 ATGCGAAACCCTAAAAGTCCCCATTTGTTAATGGGTGAGGATGGGGATCCCTCCGAGAGAGCATTGTCCGTGGACTCCACCGAATCCAGGTGGGTTTTCCAGGAGGACGATGATCCATCCGAGATTGAGGACTTCGATGTTTCCGATTTGCGGCACCAGTCTATGTTCGATTCCGAGGATGAAGATAATGCCGATCAGAGACTCGTTCGGACTGGCCCACGAATCGATTCCTTCGATGTTGAAGCTCTTGAGGTTCCCGGTGCTCAAAGAAATGACTATGAGGATGTAAGCATGGGAAAGAGTATTGTGTTGGCTTTCCAAACTCTTGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATATACTTTCAGTGTTATGTTTAGGAAGGCCCCTATAAAAGAAAATGAAGACATTCTTGGAGCATTGTCACTTGTCTTGTATACTTTAATCTTGATTCCCCTGGTGAAGTATGTCCTTGTTGTTCTCTGGGCTAATGATGATGGTGAAGGTGGTACATTTGCGTTGTACTCCTTGATTTGTCGTAATGCTAAGGTGAATCTTCTTCCCAATCAGTTGCCATCAGATTCCCGGATATCAGGCTTTAGGCTAAAGGTGCCATCCGCTGAACTTGAAAGATCTTTAAAAATCAAGGAAAGGCTAGAGACTTCACAGACTCTGAAGAAGATCCTACTGGTATTAGTTCTTGCTGGTACTTCTATGGTAATAGCTAATGGAGTTGTTACACCAGCAATGTCAGGTTACTTTCTGCTATTGTGTCATGTATTTTTACTATCATCTGTTAATGGTTTGAAAGTTGGAGTAGATGCAATTAAGCAAGATGAAGTGGTTATGATTTCTGTTGCTTGCCTTGTCATTTTATTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTGTTTATATGGTTTTGCTCTCTTGCTGGCATTGGTATATACAATCTTGTCAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATCTATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGCTCTGAAGCCATGTTTGCAGATCTTTGCTACTTCTCTGTTCGATCGGTTCAGCTTACATTTGTATTTCTTGTTTTGCCGTGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTACTTCTGTTCCGAGTGGTGCATTCTGGCCAACTTTCCTCATTGCTAACATTGCTGCACTTATTGCAAGTCGAACTATGACAACAGCTACATTTTCGTGCATAAAACAGTCAACTGCTCTTGGTTGTTTCCCTCGTCTTAAAATAATCCATACCTCTCGGAAATTTATGGGCCAGATCTATATACCTGTCATAAATTGGTTTCTCTTGGCTGTTTCTCTGGTGTTTGTCTGTTCTATATCCAGCATTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATACACATCATCATAGCACTGGGTTTCATGGTAGTCTTCTTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTATGGAGCATAACAGATGGAAGTTGGATTATATTGGTCTTTTCTATAATAATGTTTTTTATAATGTTTGTATGGAACTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAATGGATTTAATGCGAGAATTAGGCTGCAACCTCGGGACAATACGAGCTCCTGGGATTGGTTTACTCTATAATGAGTTGGTCAAAGGAATTCCAGGAATTTTTGGTCATTTTCTAACCACACTTCCAGCAATACACTCCATGATCATATTTGTGAGTATTAAGTATGTCCCAGTTCCTGTGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGACGAGTCTGCCAGAGAAGCTATCATATGTTTCGTTGCATTGCCAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAGACTTTTGAACAACTGCTGATGGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAAGAGAGGTCACTTGAGAGTGATGGGGATGATGATACTGATTTAGAGGATGAGTATTCTGGTTCTAGGGTTCTCATAGGTCCCAATGGGAGTGTTTACTCGCTCGGTGTTCCTCTTTTGGCTGATTTTAATGATACAAGCAAACCCATTTTTGAAGCAAGCACATCAGATGAGGTAAGCACAGCATCTCCTAAAACCCCAGTGCTTGATGCAGAGCAGAGTCTTGACAGAGAGTTATCTTTTATACGCAAAGCTAAAGAGTCTGGAGTGGTTTATCTTCTTGGTCATGGGGACATAAGGGCAAGGAAAAACTCATGGTTTATCAAGAAACTAGTTATAAACTATTTTTATGCCTTCCTGAGAAAGAACTGCAGAAGGGGGATCGCAAATTTAAGTGTACCCCATTCACATCTGATGCAGGTTGGCATGACTTACATGGTTTGA 2583 0.4135 MRNPKSPHLLMGEDGDPSERALSVDSTESRWVFQEDDDPSEIEDFDVSDLRHQSMFDSEDEDNADQRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSMGKSIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPIKENEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVNLLPNQLPSDSRISGFRLKVPSAELERSLKIKERLETSQTLKKILLVLVLAGTSMVIANGVVTPAMSGYFLLLCHVFLLSSVNGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFTSVPSGAFWPTFLIANIAALIASRTMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIIALGFMVVFLGLELTFFSSVLWSITDGSWIILVFSIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCQRSYHMFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDTDLEDEYSGSRVLIGPNGSVYSLGVPLLADFNDTSKPIFEASTSDEVSTASPKTPVLDAEQSLDRELSFIRKAKESGVVYLLGHGDIRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSHLMQVGMTYMV. 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05204 860 MobiDBLite consensus disorder prediction 1 42 - -
Seca12g05204 860 NCBIfam potassium uptake protein 104 860 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05204 860 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 97 858 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05204 860 MobiDBLite consensus disorder prediction 7 23 - -
Seca12g05204 860 Pfam K+ potassium transporter 105 688 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05204 Seca-Chr12 140691582 140698643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05204 23 860 Inorganic Solute Cotransporters AT5G09400 78.410 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05204 - - gmx:100803841 1486.09