Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g05194 | ATGGAGGACTATCATGTAGCGAAATTCGTCCAGCTCAAACGGCAAGAGCTAGGACTTTTTGCTATATATGACGGACACCTGGGAGACAGTGTACCGGCATATTTACAAAAGCATCTCTTTTCTAATATTTTGAAGGAAGAGGACTTCTGGAATGATCCATTCATGTCCATTTGTAAAGCTTATGAGACAACAGATCAGGCCATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCTGTGACTGCAATTCTCATCAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTTTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGATCATGAACCCAATACTGAACGGGGTAGCATTGAGAACAGAGGTGGCTTTGTCTCAAATATGCCAGGTTCTTCTATTAACCCTGAGCAATTTCTTCATTTTTGGGTTATATCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCGGTTTCTCGAGCATTTGGAGACAAAAACCTCAAAACACACTTGCGATCTGATCCTGACATTCAGTATGCTGATATTGACCCAGATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAAGCTGTTGATATTGCAAGAAGGATAAAGGATCCACAAAGGGCAGCGAAACAGCTACTTACTGAGGCATTGAACAGAGAGAGTAAAGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGCATGA | 759 | 0.4242 | MEDYHVAKFVQLKRQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWNDPFMSICKAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGSSINPEQFLHFWVISGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADIDPDIELLILASDGLWKVMANQEAVDIARRIKDPQRAAKQLLTEALNRESKDDISCIVVRFKA. | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g05194 | 252 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 250 | IPR001932 | - | |
Seca12g05194 | 252 | Gene3D | - | 1 | 252 | IPR036457 | - | |
Seca12g05194 | 252 | SMART | PP2C_4 | 1 | 248 | IPR001932 | - | |
Seca12g05194 | 252 | CDD | PP2Cc | 1 | 250 | IPR001932 | - | |
Seca12g05194 | 252 | PANTHER | PROTEIN PHOSPHATASE | 1 | 250 | IPR015655 | GO:0004722|GO:0006470 | |
Seca12g05194 | 252 | FunFam | Probable protein phosphatase 2C 39 | 1 | 251 | - | - | |
Seca12g05194 | 252 | SUPERFAMILY | PP2C-like | 1 | 251 | IPR036457 | - | |
Seca12g05194 | 252 | Pfam | Protein phosphatase 2C | 150 | 243 | IPR001932 | - | |
Seca12g05194 | 252 | Pfam | Protein phosphatase 2C | 1 | 136 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g05194 | Seca-Chr12 | 140527910 | 140531479 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g05194 | 1 | 251 | PP2C-type Phosphatase Gene Family | AT1G22280 | 69.261 | 6.88e-128 | 362 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g05194 | K17506 | - | gmx:100801722 | 431.024 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca12g05194 | 12 | 140527910 | 140531479 | Seca12g05194 | 12 | 140527910 | 140531479 | ECH |