Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05188 ATGCTCATTACTCAATTGCTCTTATATTTTTGTAATAGAAAGAACAGACCACCGCTGACGTGGAGGGTGCTGTTGATGTCAATTCTTAGCGGTTTGTTTGGAGGGAGTTTATTCCAAAACCTTTTTATCAATTCTTTGGATTTGATATCGGCGACATTTGCATGTGCCATTTCAAATCTTGTTCCTGCTATCACTTTTATCTTCGCTGTCTTGTGCCGCATGGAAAAGTTAAATATGAAAACCGCAGAAGGGACTGTGAATGTGTTGAGAACAGTAGTTGGAGTTGGCGGATCAATGGTGCTGACATTTTTCAAAAGGGCACAAATCAACATATGGACCTTCCACAATAATCTTATGCATCAAAATCAAAATGGCCACATAGGAACACGAAATGCTGACAATACAAGAAAAATTCTTGGTGTTTTATGTGGTCTTGGAAATTGCATGAGTTTTTCATTATGGCTCATCATTCAGGCTAAGATGAGTAAAGAATATCCAAGCCAATACTCAAGCACAACATTGATGTCCTTAATGGGGGCAATACAAGCCACTGTCTTTGCCCTTTGTGTTGAGAAAGATTGGAGGCAATGGAGGTTGGGGTGGAGTATTAGGCTTCTTCCTGCGGTTTATTTGGGAATTGTGGTCTCTGGATTAGTGATTATCATCATTACATGGTGTGTACAATTGAGAGGTCCATTGTTTTCATCTATTTTCAACCCTCTCTGCCTTGTGGTGGGGGCTATTGCTGGTTCCTTGTTGTTAGATGAGAAACTAACTGTAGGAAGTGTGATTGGAGGAGTCATAATTGTTTGTGGCTTGTACATGGTGCTGTGGGGTAAGAGTGAAGAAATGAAAAAGATGAATATGGAGCCACCAGACAATACCCAAGAATTTGAAGTGACTGAGGTTGTTAATGTCAGGTCTACGTCTGTAGATAATGAGAATAGTGACTGCAGCAACAATATTACTAGTGAGAGGAATATTACGGGAGACGTCTTAGATACACAACTTGATAATTGA 1020 0.399 MLITQLLLYFCNRKNRPPLTWRVLLMSILSGLFGGSLFQNLFINSLDLISATFACAISNLVPAITFIFAVLCRMEKLNMKTAEGTVNVLRTVVGVGGSMVLTFFKRAQINIWTFHNNLMHQNQNGHIGTRNADNTRKILGVLCGLGNCMSFSLWLIIQAKMSKEYPSQYSSTTLMSLMGAIQATVFALCVEKDWRQWRLGWSIRLLPAVYLGIVVSGLVIIIITWCVQLRGPLFSSIFNPLCLVVGAIAGSLLLDEKLTVGSVIGGVIIVCGLYMVLWGKSEEMKKMNMEPPDNTQEFEVTEVVNVRSTSVDNENSDCSNNITSERNITGDVLDTQLDN. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05188 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 6 92 - -
Seca12g05188 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 194 281 - -
Seca12g05188 339 PANTHER WAT1-RELATED PROTEIN 6 290 IPR030184 GO:0016020|GO:0022857
Seca12g05188 339 Pfam EamA-like transporter family 6 90 IPR000620 GO:0016020
Seca12g05188 339 Pfam EamA-like transporter family 139 277 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05188 Seca-Chr12 140423253 140438034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05188 12 306 Nodulin-like Gene Family AT1G25270 39.333 1.94e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05188 - - lja:Lj4g3v0336250.1 399.823