Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05094 ATGGGCGAAGAACTTTCTGGTTTGGGTTTTAATGAGTTATGGCATCTGGAGAATCAACTGGAGATGAGTTTGAAGAGCGTTCGCACAAGAAAGGATCAAATTTTTAGTGAAGAGATCAAAGAATTACACAAGAAGGAAAGCCTCCGTGGTCAAGAAAATGAAGAACTTCATAAGAAGATAAATCGCATCCATAAGGAAAATGCAGAACTACGCAAGGTTATTGAAGCAAAGCGTACAGAAGAAGTAAATGCAACATCCAATTTTTCATACAGTATCAGCGATGGATACGAATATGATATTAATATTGTTGAGCCAATCAGTCTGCAGCTAAGGCAGCCACAGCCTCATCAATACAAACCACCAGCCAAAGCAATGAAATTGGGGTATTCCCTCAAACTGATGATATAA 408 0.3873 MGEELSGLGFNELWHLENQLEMSLKSVRTRKDQIFSEEIKELHKKESLRGQENEELHKKINRIHKENAELRKVIEAKRTEEVNATSNFSYSISDGYEYDINIVEPISLQLRQPQPHQYKPPAKAMKLGYSLKLMI. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05094 135 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca12g05094 135 Coils Coil 53 80 - -
Seca12g05094 135 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05094 Seca-Chr12 138706574 138708467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05094 1 129 MADS-box Gene Family AT3G57230 43.846 2.71e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05094 K09264 - gmx:100808145 142.124