Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05085 ATGGAGAACTATCAATACCCACCGTCGTACCCAGATTCCGGCGACTCCTCGCCGCGTTCTAGGGAGATCGATTTCGAGAATCCGGCACCATGGGAGGAGCAGCAGCAGCAGAATTACAAGGCGAAGTTCATGTGCAGCTATGGAGGGAAGATCCAACCACGCAGCCACGATAACCAGCTCTCCTACGTCGGCGGCGACACAAAGATACTCGCCGTCGACCGGAACATCAAGTTCCCGGCGTTCCTCTCGAAGCTCGCCGCGCTCTGCGACGCCACACCACAAGAACTCACCTTCAAGTACCAGCTTCCCGGCGAGGATCTCGACGCTCTCATCTCCGTCACCAACGACGATGACCTTGAGCACATGATGCATGAGTACGATCGTCTCTATCGCCCTTCTGCAAAACCCGTGAGGATGAGGCTCTTCCTCTTCACAACACCGAATTCGGGTTCTCTTCCTCCTCAACCCGACCCGATTAAGCAACCCTCCAACGTTGACTATCTCTTCGGCCTCGAGAACAAGACGCTTGCTCCTCCGCCTCATCCTCCTTCCTTTGTCAAGTTCCATGACTCTGTTCCCGACCCTGTCGCGCCAAATCCAGAGTACCCGTCTCGTGGACCCGTTTCTGATAGGGTTATCGGGTCGGATAATGTGAACCCGATTGATATTCAGAGGCAGTTGCAGCGCTTGCAAGTTGGGGAGAATGATCAGTCGTTGTACCGGAGGAGAAGTGAAGACGGATTCTCCGGAGGTTATGCCGCCGCGGGTCCCGCCGGCGTAGGAGATTATTACTTGCAGAAGATGCCGGAGAAGGTCCCGCAATCTAATTCTCCGGCGACTGTTCCACACCCGGGGGGTTACTGGCCGGAAAAGCAATTTCCGGGCGATGGTTTCCCGGCGGCGGGGACGAATGCTCCCGGAGGAGGGGACCAGCCGGTTTATGTGATTCCGGCGCCGGGGACGTTCTATCACGCGCCGGTGGTGCGTCCACCGGCTGCGCCGGTGACGCAAGGGTACTACGCGGTGCAGAGAATGGGTTCCGATGGTTACCGGGAACAGCCGGTGTACGGCGGCATGATGCCTTCGAAAGCGGCGTTTTCTTCAGCTGGTCCGGCAAGTTTGGCACCGGCGCAGCCGATTAAAGGTTCGGCGTATGGGGAAGGATACGGCGTCGTTCGGCCAGCTGGGGTGCCGGATAATACGGGCGCTGGTGCTTACGCGCAGGTGGCGTATGATAGTGCAAGTGGGAGACAGGTTTACTATACTGCGCCGGGAGGGGTGGTCCACGCACCTCCTTACCAAGGGGTTGCTCCGGTGGTCAGCGCTGACATGAGACAGGGTGGGGTTTCGTTGGGCCAGGATGTTAAAGGGGTAAACAAGGTTTCCCAAGGATCTGTGTGA 1401 0.5789 MENYQYPPSYPDSGDSSPRSREIDFENPAPWEEQQQQNYKAKFMCSYGGKIQPRSHDNQLSYVGGDTKILAVDRNIKFPAFLSKLAALCDATPQELTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPSAKPVRMRLFLFTTPNSGSLPPQPDPIKQPSNVDYLFGLENKTLAPPPHPPSFVKFHDSVPDPVAPNPEYPSRGPVSDRVIGSDNVNPIDIQRQLQRLQVGENDQSLYRRRSEDGFSGGYAAAGPAGVGDYYLQKMPEKVPQSNSPATVPHPGGYWPEKQFPGDGFPAAGTNAPGGGDQPVYVIPAPGTFYHAPVVRPPAAPVTQGYYAVQRMGSDGYREQPVYGGMMPSKAAFSSAGPASLAPAQPIKGSAYGEGYGVVRPAGVPDNTGAGAYAQVAYDSASGRQVYYTAPGGVVHAPPYQGVAPVVSADMRQGGVSLGQDVKGVNKVSQGSV. 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05085 466 PANTHER OS05G0427100 PROTEIN-RELATED 10 315 - -
Seca12g05085 466 MobiDBLite consensus disorder prediction 1 33 - -
Seca12g05085 466 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 146 - -
Seca12g05085 466 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Seca12g05085 466 MobiDBLite consensus disorder prediction 1 16 - -
Seca12g05085 466 SUPERFAMILY CAD & PB1 domains 56 150 - -
Seca12g05085 466 SMART PB1_new 55 146 IPR000270 GO:0005515
Seca12g05085 466 CDD PB1_UP2 44 144 - -
Seca12g05085 466 Gene3D - 61 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05085 Seca-Chr12 138527950 138529350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05085 39 152 MAP Kinase Kinase Kinase AT5G57610 47.826 1.36e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05085 - - adu:107480527 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05085 12 138527950 138529350 Seca6g05058 6 117821929 117823323 PCT