Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g05076 | ATGCGCATAACCAGTGCGATAGCAAATAGCAACAAACCTCTTTTCCATAATTCTCCCTTACCTCAATTGCTATGTGCGCGATCTCATTCATCCACCAATTTGTTCGTCACAGTTGACCTCCGCACTGCAATTTTTGGTTTTGTTTTGGAAAAAAAAGGGCTTTCCTACGATACGAATGAAACTGTACTAAGAGACGCCTTTGGGCAACATGGGGAAATCATTGAAGTTAAAGTAATATGTGATCATGTGACTGGGAAATCAAAAGGTTATGGATTCGTGCGGTTCACTTCTGAAACTACAGCTACCACAGCTTGCAAAGAAATGCACCGCCAGATTCTGGATGGCAGACGCATTCGAGTGAGTTTTGCACACAAAGGGTAG | 381 | 0.4278 | MRITSAIANSNKPLFHNSPLPQLLCARSHSSTNLFVTVDLRTAIFGFVLEKKGLSYDTNETVLRDAFGQHGEIIEVKVICDHVTGKSKGYGFVRFTSETTATTACKEMHRQILDGRRIRVSFAHKG. | 127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g05076 | 126 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 52 | 119 | IPR000504 | GO:0003723 | |
Seca12g05076 | 126 | SUPERFAMILY | RNA-binding domain, RBD | 52 | 125 | IPR035979 | GO:0003676 | |
Seca12g05076 | 126 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 47 | 125 | IPR000504 | GO:0003723 | |
Seca12g05076 | 126 | SMART | rrm1_1 | 52 | 121 | IPR000504 | GO:0003723 | |
Seca12g05076 | 126 | Gene3D | - | 17 | 126 | IPR012677 | - | |
Seca12g05076 | 126 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 52 | 125 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g05076 | Seca-Chr12 | 137917028 | 137918126 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g05076 | 54 | 125 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 40.278 | 4.17e-12 | 60.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g05076 | K13195 | - | gmx:100306540 | 160.229 |