Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05070 ATGTTGGAGTCTTTAGCTTGTTGTCAAAGCTTTAAGGGATATGATCTAACCAAGCAAAAGAGTCCGGGTTATTCTCGTGCTATTTCACCAATCTGTAGAAGTTCTATGTTCATGCTGTATTCAATTGACAAGCAAGTGCCACTACTATCACGGGGTGCTAGTCATGGGGTTTTTCATAGGACTACTGTGTCAGAAAATTTCTTTCAAAGGAAGCCTCTCAATGTTCCTTCATTTTCTGGTTGGAAAGGATTCTATTTCTCTAAGTATAGGCCACTGCGTTGGGATAGGCTACAGACAAGCGTAGCATATGATGTTGCCGGTGCTGTTGAAGTCATCAATGATTTAGGATTGGACACACTTACTTTCTTGGCTGTGACTGTCTTAATTGTGCCTTCATTCAAGTTAATTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGGAACCTTACAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTAGCACGTCTGAAAGCTCTTGCAAAATATGCCTTTGGAATGGGATTGGCTCAGGTTGTACTATCTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTATTGGAACAAAAATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTGGTGAACATCAGAAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAGAGGTGAGCTTCCTACAAGATTTGGTTCAGCTACTCTTGGAATACTTCTTTTGCAGGACTTAGCTGTTGTCCCACTTCTGGTCATACTTCCAATATTAGAGACCCAGAATATGTCTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTAGGTCTGCTTTCTCTTGGGGGAAAGTATATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTCTGCTTGCTGACTATTGCAGGGACTTCACTAGTCACACAGAATTTGGGCTTCAGTGATACACTTGGAGCATTTTTAGCTGGGGCAATCTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTCAGGGGCTTGCTGCTTGGATTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCGCTCTTGGGGGGTTTAATTGCTATCAAGACATTGATCATAACTGCGATTGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTGGTATTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCACTTGAGCTCAACAAGCTGCTTATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGTTTTATTGAAGACAAATCTGATGCTGAGAATAAACAGAAAGCTTCTGGCATGGTTGACTTCAATGCTAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGCCCAGGTCCTGGCCAATTTCCTGTCCAACCCATTGGCTTCAGGAGGAGATAATGATGCAACAGGATGGCCGTATGTGGCATTTGATCTTGACCCCAGGGTAGTAAAGGCAGCTAGAAAACTTGGTTTTCCAATTCTCTATGGGGATGGATCACGTCCAGCCGTCCTTCAATCTGCTGGTATCCAATCTCCAAAAGCTATCATGGTTATGTACACTGGGAAGAAGAAGATAATTGAAGCTGTTCAGAGTTTACGATTGGCTTTTCCTGCAGTCCCAATCTATGCCAGAGCTCGAGATCTCAAGCATCTTTTAGATTTGAAGAAAGCAGGTGCAACAGATGCCATTTTGGAAAATGCTGAGACTAGCTTACAGCTGGGTTCTAAGCTGCTGACAGGCCTTGGGGTGATGTCTGACGATGTAGCATTTTTGAGTCAGATTATTAGAGATTCCATGGAGGTACAAGCTCAAGAAGCAATCAACCAATCAGAATATCGTGAATTAGATATTATGAAACCACTGCAGGTGAGAGTTGCTGATGTGAAGGAGGCACGTGCACCGATGACAACAACTTCAGCAGAATATGAATTATCAGTACTGAACCAGAAAGATCAAGCTTCATTGGATAGGATTCAGAAGGAAGTAGACTCTGAAAAACAAGATTATGAACAAAATCAAGCTGTTAAATTAGAAGGAAATGGTGTTTTATGTAGCAAAGAAGATACTGAAGAAAGCTCAATGGTTGTAACTCAAGATGCTCTAGGACAGAAGAATCTGGTAGACTCATCAATCCCTTCCCACACTGCCATGGAGGAACCTGACAATGTAGATAGGGTTTCTTCCCATTAG 2490 0.4217 MLESLACCQSFKGYDLTKQKSPGYSRAISPICRSSMFMLYSIDKQVPLLSRGASHGVFHRTTVSENFFQRKPLNVPSFSGWKGFYFSKYRPLRWDRLQTSVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPSFKLIKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAIGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAERGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESIWPMLAQESLKALGGLGLLSLGGKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDKSDAENKQKASGMVDFNASEPVVILGFGQMAQVLANFLSNPLASGGDNDATGWPYVAFDLDPRVVKAARKLGFPILYGDGSRPAVLQSAGIQSPKAIMVMYTGKKKIIEAVQSLRLAFPAVPIYARARDLKHLLDLKKAGATDAILENAETSLQLGSKLLTGLGVMSDDVAFLSQIIRDSMEVQAQEAINQSEYRELDIMKPLQVRVADVKEARAPMTTTSAEYELSVLNQKDQASLDRIQKEVDSEKQDYEQNQAVKLEGNGVLCSKEDTEESSMVVTQDALGQKNLVDSSIPSHTAMEEPDNVDRVSSH. 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05070 829 Coils Coil 748 775 - -
Seca12g05070 829 FunFam K(+) efflux antiporter 3, chloroplastic 114 513 - -
Seca12g05070 829 Gene3D - 539 710 - -
Seca12g05070 829 Pfam TrkA-N domain 540 663 IPR003148 GO:0006813
Seca12g05070 829 FunFam Glutathione-regulated potassium-efflux system protein KefB 537 709 - -
Seca12g05070 829 MobiDBLite consensus disorder prediction 805 829 - -
Seca12g05070 829 Gene3D - 114 513 IPR038770 -
Seca12g05070 829 ProSiteProfiles RCK N-terminal domain profile. 539 671 IPR003148 GO:0006813
Seca12g05070 829 Pfam Sodium/hydrogen exchanger family 121 506 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca12g05070 829 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 102 766 - -
Seca12g05070 829 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 539 677 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05070 Seca-Chr12 137861754 137874080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05070 1 733 Inorganic Solute Cotransporters AT4G04850 72.493 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05070 K03455 - gmx:100798214 1283.47