Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05036 ATGGCTTCCCGGAACCAGAACAGGCCTCGCAGCCCCTCCAACAGAAAAGTCGGTGCCGAAGAAGTCACCACAGACAAGCGTCGAAGGGTTGGAGCTGAAAAGATGGAGCGACAGGGAGTGGCTGGGAGGACCAGAACGCCATTTTCGGTTGTGAACAATTCAAATGCTGCAACTGACGCCGAAGGAACAGAGTGTAGCACCGTTGAGTTCACAAAAGAGGACGTAGAGGCATTGCTGAATGAGAAGATGAAAAAGGGGAACCCCTATGATAATAAGAAAAAGATGGAGCAGATGGGGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGAAAGTGAGAGTTGAAGAAGGCCTTGTTCAAGAAAAAGAAAAGCTTCAGTCAGAGCTAGAGTCTGCTGTGAAGAAGTGCAGTGATACTGAGACTGAGATGAAAAATAAGATTGAGGAATTGAATGAGACTATATCTGATGTGAGGAAGACAATAATTTCTTTAGAAGAGAAAATTATGAAGGAAGAATCAGATAAGTTGGAAGCGATTAATTGTTATAGAAAAGAAAAGGAAGCCCGAAGTGCAGCTGAGAAAGTTGTGGATGAAAAATCAGCTGAACTTGAAAAAGTACGGGATGAGAAATCAGCTGCTGAGCAGAAGGCCATTTCAAATGAGGACTTGTACAAACGATCACAAGAGTATAATATGAGCCTGCAGCAGTACAATAGTCGCCTTCAATCAGATCTTGAAACAGCTAATGAAGCACATAAACGACTTGAAACAGAAAAAGCAACCATTGTTGAGAGCCTTAGCAATGTAAGAGGTCACAATAAGGCATTGCAGGATCAAGTGGTATCTCTTAAAGTTTCACAGGATGAGGCTACAAAGCAGAAAGAAATATTAGCAAATGAACTCAAATGCCTCCGTGAAGAGTTAAAACAAATTAGAGATGATCGCGATCGCCAGCATGGACAAGTAAATGCTTTAATTGGAGAAGTTGCAAAATACAAAGAATGTACAGGGAAATCATTTGCACAATTGGATGCCTTGACAATTAAAGCAAATGCTCTTGAGGAAACTTGTTCTTCTCAAAAGGAGCAAATACATATACTGCAGCAGCAGCTGATTGCTGAAAAGGAGAAGTTGAAGATGACTGATTTATCTGCGTCAGAAACAAGAACAATGTTTGAAGAGCAGAAAAGAATTATATGTGAACTACAAGATCGATTGGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAGAAGCTAAGGAAAAAACTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGTGTGTTTTGCCGTGTGCGACCTTTACTACCAGAGGATAGTATGGGAACAGACATGGTTGTTTCCTACCCTATGTCAACAGAAATGCTTGGCCGGGGCATTGAATTGACACAAAGTGGGCAGAAGTACCAGTTTACATTTGACAAGGTGTTTAATGACGGGGCTTCTCAGCAGGATGTTTTCGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTTTGCATCTTTGCTTATGGGCAGACAGGTTCAGGCAAAACCTATACAATGATGGGAAGGCCTGACGCTCCAGATCTGAAAGGGTTGATACCACGTTCTTTAGAACAGATATTCCAGATCAGTCAGTCCTTGAAAGACCAGGGGTGGAAGTACAAAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGAGATTTGTTGTCACCAAATCGGTCAAGTAGGATTGATCAGACACGAACAGACAACAGTGTTCCCAGCAAGCAGTACACTATTAATCATGATGCAAATGGAAACACACATGTAACGGACCTCACCATTGTGGATGTATGTAGCGTGAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCAGGTCAGTGGGAAGAACACAGATGAATGAACAGTCATCAAGAAGCCACTTTGTCTTTACTTTGCGTATATGTGGTATAAATGAGAACACTGAACAACAAGTGCAAGGGGTCTTAAACCTGATTGATCTGGCTGGAAGTGAAAGACTGTCAAGGAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAGAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTTAGGAATTCAAAACTGACATACCTTCTTCAGCCATGTCTTGGTGGGGATTCGAAAACGTTGATGTTTGTCAACGTCTCACCTGATCAATCTTCAATTGGTGAATCACTTTGCTCTCTTCGTTTTGCGGCCAGAGTCAATGCCTGTGAAATTGGGATTCCGCGGCGTCAGACTCAGACATCCACACGGTCCTTAGATTCTCGGTTGAGCTATGGCTAA 2394 0.4261 MASRNQNRPRSPSNRKVGAEEVTTDKRRRVGAEKMERQGVAGRTRTPFSVVNNSNAATDAEGTECSTVEFTKEDVEALLNEKMKKGNPYDNKKKMEQMGDLIKRLKLCVRWKVRVEEGLVQEKEKLQSELESAVKKCSDTETEMKNKIEELNETISDVRKTIISLEEKIMKEESDKLEAINCYRKEKEARSAAEKVVDEKSAELEKVRDEKSAAEQKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETANEAHKRLETEKATIVESLSNVRGHNKALQDQVVSLKVSQDEATKQKEILANELKCLREELKQIRDDRDRQHGQVNALIGEVAKYKECTGKSFAQLDALTIKANALEETCSSQKEQIHILQQQLIAEKEKLKMTDLSASETRTMFEEQKRIICELQDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDSMGTDMVVSYPMSTEMLGRGIELTQSGQKYQFTFDKVFNDGASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQISQSLKDQGWKYKMQASILEIYNETIRDLLSPNRSSRIDQTRTDNSVPSKQYTINHDANGNTHVTDLTIVDVCSVNEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINRSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDQSSIGESLCSLRFAARVNACEIGIPRRQTQTSTRSLDSRLSYG. 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05036 797 CDD KISc_C_terminal 432 776 - -
Seca12g05036 797 ProSiteProfiles Kinesin motor domain profile. 434 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 MobiDBLite consensus disorder prediction 45 61 - -
Seca12g05036 797 ProSitePatterns Kinesin motor domain signature. 674 685 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca12g05036 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 772 IPR027417 -
Seca12g05036 797 Coils Coil 116 175 - -
Seca12g05036 797 Coils Coil 190 217 - -
Seca12g05036 797 MobiDBLite consensus disorder prediction 1 61 - -
Seca12g05036 797 Coils Coil 239 259 - -
Seca12g05036 797 Coils Coil 344 371 - -
Seca12g05036 797 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 PRINTS Kinesin heavy chain signature 644 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 PRINTS Kinesin heavy chain signature 724 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 PRINTS Kinesin heavy chain signature 675 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 Gene3D Kinesin motor domain 376 776 IPR036961 -
Seca12g05036 797 MobiDBLite consensus disorder prediction 19 40 - -
Seca12g05036 797 FunFam Kinesin-like protein 380 776 - -
Seca12g05036 797 PANTHER KINESIN-LIKE PROTEIN KLP-3 293 790 IPR027640 GO:0003777|GO:0007018
Seca12g05036 797 Pfam Kinesin motor domain 440 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 Coils Coil 288 322 - -
Seca12g05036 797 SMART kinesin_4 432 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g05036 797 MobiDBLite consensus disorder prediction 586 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05036 Seca-Chr12 136867387 136873841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05036 343 771 Calmodulin-binding Proteins AT5G65930 37.931 2.78e-81 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05036 K10405 - gmx:100780319 1229.54