Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05034 ATGTCAGCATATCGATGGAAAAGCTTCGAGGAGAACGAGGATCGCCCCACCAAGCCTCGCCGCTATGGCGTCACCGAAATGAGAAGCCCCAATTACACTCTCTTCAGCCACAACGTTCTTCAGGATATTTTTGAAGCTATGGGAGAATATGTTGATGGGTTGAAGTTTTCTGGGGGTTCTCACAGCTTGATGCCGAAGTCTTTTATCAAACAAGTGATTGACATGGCCCATCAGCATGATGTGTATGTTAGTACAGGTGACTGGGCTGAACACATGGTTCGCAAAGGTCCAACAGGTTTCAATGACTATGTGGAGGAATGCAAGCAATTGGGTTTTGACACAATTGAGCTGAATGTGGGCTCACTTGGAATTCCTGAAGAAACCCTTTTGAGATTTGTTCGCTTGGTCAAAAGTGGTGGTCTGAAAGCTAAGCCTCATTTTGAGGTGAAGTTTAATGAGTCTGATATTCCCAAAGGTGGTAATAGGGCTTATGGGGCTTATATTCCCCCAGCACCTAGATCATTTGGTAAGCATATTTAA 540 0.4463 MSAYRWKSFEENEDRPTKPRRYGVTEMRSPNYTLFSHNVLQDIFEAMGEYVDGLKFSGGSHSLMPKSFIKQVIDMAHQHDVYVSTGDWAEHMVRKGPTGFNDYVEECKQLGFDTIELNVGSLGIPEETLLRFVRLVKSGGLKAKPHFEVKFNESDIPKGGNRAYGAYIPPAPRSFGKHI. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05034 179 MobiDBLite consensus disorder prediction 1 23 - -
Seca12g05034 179 Gene3D Aldolase class I 7 165 IPR013785 -
Seca12g05034 179 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 14 154 IPR003830 -
Seca12g05034 179 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 12 156 IPR036112 -
Seca12g05034 179 MobiDBLite consensus disorder prediction 7 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05034 Seca-Chr12 136763168 136765157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05034 4 174 Subtilisin-like Serine Gene Family AT4G21320 75.439 3.97e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05034 - - gmx:100805668 321.242