Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g05018 | ATGTGTGAATCTGGGTTTGTTTCTGATCTCGCAACTTTTGTTAGTGTTTCTTCTACTTGTTTTCAACTGGGTTCTAAGTGCCCCTTTGTTGGGATTTACATCTTCACTGACAAGAAGCTTGAAGATATTGTGCCTTCGTCTCACAACTGTGATGTTCCCCCTGTGAATCATACTGACTACTAG | 183 | 0.4098 | MCESGFVSDLATFVSVSSTCFQLGSKCPFVGIYIFTDKKLEDIVPSSHNCDVPPVNHTDY. | 61 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g05018 | 60 | Gene3D | - | 12 | 53 | IPR014722 | - | |
Seca12g05018 | 60 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 14 | 60 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Seca12g05018 | 60 | SUPERFAMILY | Translation proteins SH3-like domain | 26 | 59 | IPR008991 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g05018 | Seca-Chr12 | 136558313 | 136558495 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g05018 | 14 | 60 | Eukaryotic Initiation Factors Gene Family | AT1G13950 | 70.213 | 6.43e-16 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g05018 | K03263 | K02180 | zju:107429033 | 67.3958 |