Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05018 ATGTGTGAATCTGGGTTTGTTTCTGATCTCGCAACTTTTGTTAGTGTTTCTTCTACTTGTTTTCAACTGGGTTCTAAGTGCCCCTTTGTTGGGATTTACATCTTCACTGACAAGAAGCTTGAAGATATTGTGCCTTCGTCTCACAACTGTGATGTTCCCCCTGTGAATCATACTGACTACTAG 183 0.4098 MCESGFVSDLATFVSVSSTCFQLGSKCPFVGIYIFTDKKLEDIVPSSHNCDVPPVNHTDY. 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05018 60 Gene3D - 12 53 IPR014722 -
Seca12g05018 60 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 14 60 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Seca12g05018 60 SUPERFAMILY Translation proteins SH3-like domain 26 59 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05018 Seca-Chr12 136558313 136558495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05018 14 60 Eukaryotic Initiation Factors Gene Family AT1G13950 70.213 6.43e-16 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05018 K03263 K02180 zju:107429033 67.3958