Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04964 ATGATTTACAAGCAAGATGTTGGCGAACAATTCAGGTTAGAGTATGCATGGAGATTGTTGAAAAATCAACCTAAATGGTCAAATGCGTCAGTTGAAGGAGGTAGCAAAAGAACAAAGATTTCTACAGGTGGGAATTACTCATCATCTTCTAATCCCGAGTCACCAATGACCAACGAGTACAACCCAACTTCACCCACTTTGGTTCGTCCAATGGGGACAAAGGCAGCAAAAAGAAAGGGAAAATCTGGAGCACAAGAACCATCTGCTATCAATGAGGAACTAGCTGCAGTGACAGCGTTAGAGAAGGAGAAAGTAGCCAGTATACTTGAAATAACACGTGTCAAGGAAGAACAAAACAAGTTGAAGAAACGGGAGTTAGACATGAAGGAGAGACAGCTTGACTTGGCGTTCCTATTCTAG 420 0.4214 MIYKQDVGEQFRLEYAWRLLKNQPKWSNASVEGGSKRTKISTGGNYSSSSNPESPMTNEYNPTSPTLVRPMGTKAAKRKGKSGAQEPSAINEELAAVTALEKEKVASILEITRVKEEQNKLKKRELDMKERQLDLAFLF. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04964 139 MobiDBLite consensus disorder prediction 25 89 - -
Seca12g04964 139 PANTHER - 2 132 - -
Seca12g04964 139 MobiDBLite consensus disorder prediction 25 68 - -
Seca12g04964 139 Pfam No apical meristem-associated C-terminal domain 10 134 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04964 Seca-Chr12 135354259 135354678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04964 2 84 Glutathione S-transferase Gene Family AT5G41240 40.000 2.88e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04964 - - cam:101491527 168.703