Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04943 ATGCACGGGAGGTATGTGGATGTGGCAAGGGAGAAGCGAGGTTTGGATTCGACTTCCACTGAAGAAGGACAGCCTGATCGGAAGAGACCAGCTTTGGCTAGTGTAATTGTTGAAGCGCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAAGCTTAATGTAAAATTCAGGTCTTCTCCGAAACGGATAGAAGGCCCTGGTGGGAAAATTTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTCTTTACTGGAGGGAAAGTGGAGGGTGAGCAAGGGGCAGCCATACATATTGTTTTGATTGACGCAAACACAGGCCATGTTGTCACGACTGGCCCAGAGTCATGTGTCAAACTAGATGTCATTGTCCTTGAGGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGATGAGTTTGACAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGACCCCTTTTAACTGGTGATCTGCAAGTCACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTCTCTTTTACTGACAACTCTAGCTGGATAAGAAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTGCCTCAGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTAAATGACGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCAGGCATATTTACTGTTGAAGACTTCCTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATAGCCTGATTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGAAACGTGGGTGTTGTTTTCAATAACATTTATGAATTGAGTGGCCTAATTGCCAACGACCAATATTACTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGTTTATGTAGACACGCTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGGTAAATTACAACCAGGATAAGACCTTGGACACGGCCCATCCTCAGGCTCCAATGGGTTCCCATGAATATTCAAACTCAATTCAGCAGATTTCCATCCCAAGTTTGCCACTGCCGGTACAAACAGGCCAGCCTTCAATGGATACAGGAGTTACAGTTGGAGGTTATCATGATGGTACAACTACCAGATTCTCCATGCAACCACAGAATGCTAATCTTAATTCTTCTATTCAATTTGATGATAATGCATATCCACTACAAAACCAGTTGATGAGTGTTCCACATCAAGCTCAACTTCCCAGAAATGAAAATGGGCTGACTCTTGGTCCATCACAATCAGCCACGCATGGCTTCCCGACTGTCAGCAGTTCAAATTCTACTTACAGAGGAGTTGAAGACTTCTTCTCAGAGGAGGAGATTCGCATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAACATGGGTGGCCCAGCCCATGCTTCCTTTTATGCCCATGAAGATGTGTACCCCAATTCATCTGCATACATGCCTGCAAACCCCATGAGCTACAATTTTGATGATGAGCCGAACCGTTCCTCAGGCAAAGCTGTTGTTGGCTGGCTTAAGCTGAAGGCAGCTTTGAGATGGGGCATTTTCGTTAGGAAGAAGGCTGCTGAAAGACGGGCTCAACTAGTTGAGTTGGATGACTCGTAG 1890 0.4487 MHGRYVDVAREKRGLDSTSTEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNVKFRSSPKRIEGPGGKILQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDANTGHVVTTGPESCVKLDVIVLEGDFNNEDDDNWSEDEFDSHIVKEREGKRPLLTGDLQVTLKEGVGTLGELSFTDNSSWIRSRKFRLGLKVASGCCEGMRIREAKSEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDPQRLRNILGSGMSNKMWDSLIEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSESQKVYVDTLVKKAYDNWMHVIEYDGKSLVNYNQDKTLDTAHPQAPMGSHEYSNSIQQISIPSLPLPVQTGQPSMDTGVTVGGYHDGTTTRFSMQPQNANLNSSIQFDDNAYPLQNQLMSVPHQAQLPRNENGLTLGPSQSATHGFPTVSSSNSTYRGVEDFFSEEEIRIRSHEMLENEDMQHLLRIFNMGGPAHASFYAHEDVYPNSSAYMPANPMSYNFDDEPNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS. 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04943 629 Pfam Calmodulin binding protein central domain 254 320 IPR046830 -
Seca12g04943 629 Pfam Calmodulin binding protein C-terminal domain 325 387 IPR046829 -
Seca12g04943 629 PANTHER OS02G0177800 PROTEIN 10 544 IPR012416 GO:0005516
Seca12g04943 629 MobiDBLite consensus disorder prediction 1 28 - -
Seca12g04943 629 Pfam Calmodulin binding protein-like N-terminal domain 95 242 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04943 Seca-Chr12 134709779 134714265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04943 7 624 Calmodulin-binding Proteins AT5G57580 62.539 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04943 - - gmx:100812605 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g04943 12 134709779 134714265 Seca6g04971 6 117093595 117100878 PCT