Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04938 ATGGCTGTTGAAGAACTTCAACATTCGAGAAACAGTCTACCAGATCAAGTTGTTGTTCAGTGCATAAAAGAAAGATTATCTGCTTTGGGAAATTGTATAGAATGCAATGACCATGTGGTCCTCACACACATTGATCTAGATAGCAACTTGTTGAAGACAGATTTGTTAAAGAACATGCTAAACCCACTTCAGAAGGATCAGAAGGTTGGCTTGATAAAATATGTATTAAGCTTGGCCAATTTCTTCTGTGGGCTTGATGAATGCCATGGTTCAAGGGTAGATAATTTGGAATTCATGGCAGCTCATCATGAGTGTAAGGAGATAGGATATAAAGATCCAGAGTCTGAGATGCCACGTCATCATATTCAGAAGGAGCATGTAGTTTATCTTCATTTCAGCTTTCCCCAGATGTACTCTTTCTTTTCTTCTAGACTCTTTCTTTGGTTCAGTAGAAGGTTGAGTTGCTTTTGCATGGTTTATTGTTTACTTGACTGCAATGGATCATCTGAAACTTTCATGGGTTTTAAGCTTGTCTTTATTTCTGATTCCATAGATATACTTCTTCTTTCCACATTTTCTTCAGATGGTTGGTCGCGTTCAGATAGTTGCTTTAATGCTCTTGTTGCTTTGTTCTTCTTTAGTAGATTTCTTCTTTCAGCGTTTCTTCTTGTTCAGATTTGCTTTGTCTTTCTTCGGATTTTCTCTTCCTGTCTTTTGCTTGCTTCTTTGGCTATCTTCATATTCTTGTCTTCAGATGGATGCTTCATCCTGTAA 774 0.3747 MAVEELQHSRNSLPDQVVVQCIKERLSALGNCIECNDHVVLTHIDLDSNLLKTDLLKNMLNPLQKDQKVGLIKYVLSLANFFCGLDECHGSRVDNLEFMAAHHECKEIGYKDPESEMPRHHIQKEHVVYLHFSFPQMYSFFSSRLFLWFSRRLSCFCMVYCLLDCNGSSETFMGFKLVFISDSIDILLLSTFSSDGWSRSDSCFNALVALFFFSRFLLSAFLLVQICFVFLRIFSSCLLLASLAIFIFLSSDGCFIL. 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04938 257 Gene3D - 1 80 - -
Seca12g04938 257 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 4 49 IPR002769 GO:0042256|GO:0043022
Seca12g04938 257 SUPERFAMILY Pentein 4 52 - -
Seca12g04938 257 Pfam eIF-6 family 4 52 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04938 Seca-Chr12 134564171 134570076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04938 4 47 Eukaryotic Initiation Factors Gene Family AT3G55620 79.545 5.68e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04938 K03264 - cpap:110815482 79.7221