Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04898 ATGTACATGGATTCTGCATCTGTGAGGCCTCCATCGGAGACTTTGAATGATGAGACACTAAGAAAGAGTGTGCCTATGAACAACGCAATCAGGAACAAGAGTTTCAAACATGCTTTCTTCCTCATCTCACATGAGGCATCTCCCAGATCCCAAATGCTGCTGCTAGCTCTCTCTCTCTCTCTCTCGAGTTTTTTTAAACAAACAGATTTCAAGTGGGGTTTTGGGAAAGTTTCGACCTTGAGATCTTATGAGGAGGAGGACAATGCAGTTAGCCGGCTAGTAATGAAGATTTGCTTTGGGTTGTGGAGAGGTATGGTAGAAATTAGTGTTGCATGTCTTTTTTTCACCAATCTACCTATAATGTTTGGTTTAAACTTTTCATGGGTTCATGCTGATTTGAGGAAATGGATTCATGACAACGTGAGTCCTCAAGTTGCTGCAACTGTGAGAATTATCTATGGAGGTAATCCTGTTTGCACTTTACTGTGTATCATTGTATCATATGCAGAAACTTACATGTCAAAGAATAATAATGGTGAAAGGCAAAGGGTATTGTTGCATGATGTTGATTTGTTGAGAAAACATATTGATGAGCTTGCAGCACTTGAAACTTGGGATAATGGGAAGCCATATGAACACTCTGCACAGATTGTAATATTAATGTTGGATCACCCATTTTGA 681 0.3965 MYMDSASVRPPSETLNDETLRKSVPMNNAIRNKSFKHAFFLISHEASPRSQMLLLALSLSLSSFFKQTDFKWGFGKVSTLRSYEEEDNAVSRLVMKICFGLWRGMVEISVACLFFTNLPIMFGLNFSWVHADLRKWIHDNVSPQVAATVRIIYGGNPVCTLLCIIVSYAETYMSKNNNGERQRVLLHDVDLLRKHIDELAALETWDNGKPYEHSAQIVILMLDHPF. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04898 226 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 167 223 IPR016162 GO:0016491
Seca12g04898 226 SUPERFAMILY ALDH-like 173 223 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04898 Seca-Chr12 134063622 134068973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04898 180 226 Aldehyde Dehydrogenase Gene Family AT1G23800 61.702 1.08e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04898 K00128 - gmx:100786773 67.781