Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04848 ATGGTTTTCTTGACTATCTTTCTGGTCTTCCTTTCTCTTCTCTTTATCATCAAATGGTATTCCAATTCAGCAACCAGCAGCAAGAACTCACCCCCTTCACCTCCAAGAATTCCTCTACTTGGTAATCTCCACCAACTTGGCTCGCTCCCTCACCGCACACTCCAATCTTTAGCTCAGAAATATGGTCCTTTAATGTTACTTCATTTTGGGAAGGTGCCAGTGCTTGTGGTCTCCTCTGCTGATGCAGCCTCTATGGTCATGAAATCCCATGACTTGGTCTTCTGTGACAGGCCACCGCGTAAAATATTTGATATTATGTTATATGGCTTCAAAGATATGGCAACTGCTCCATATGGTGAGTACTGGAGACAAGTAAGGAGTGTCTGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCAATCTTTTCGTCGTTTGAGAGAAGAGGAAACTTCTAGAATGATGGAAAAGATTAAGGAGTGTTCTTCTTCTTCCTTGCCGGTGAACTTATCTGAGTTGTGCTCCACACTTACGAATGATATAATATGTAGAGTGGCTTTGGGAAAGAGATACAGTGAAGGAGGGACGAAATTTCAGCATCTGTTATCGGAGTTTATGGAGATAGTTGGTTCTATCTCTATAGGGGACTTTATACCATGGCTTGATTGGTTGAGTAAGGTTAATGGTTTCTATAACAAAGCAGAGAGAGTTGCCAGACATTTCGATGAGTTTATAGATGAATTAATTGAGGAGCACATTAATTATAGTACTGAGGACCAGAATGATTTTGTGGATGTTTTGCTTTCGATCCAAAAGACAAACGCTATTGGCTTCTCAATTGATAAAACTTCAATAAAAGCTTTGATATTGGACATGTTTGTTGCAGGTACTGACACTAGCTACACAGTCCTTGAGTGGGCACTGACAGAACTGTTAAGGCACCCAGTTGTGATGCATAAATTGCAAGATGAGGTGAGAAATGTGGTTGGTAACAGAACTCACGTAACTGAGGATGATTTGGGTCAGATGAAGTACTTGAAGGTTGTGATCAAAGAAACGCTTCGCCTACATACTCCACTTCCCTTACTGGTTCCTCGGAGGTGCATGAATGATATCAAACTGAATGGCTATGACATTGCAGCTGGGACACAGATAATAGTAAATGCTTGGGGAATTGCCAGAGACCCTTCATATTGGGACCAACCCCTTGAGTTTAAACCAGAAAGGTTCCTCAATAGTTCAATAGATTTCAAGGGACATGATTTTGAATTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCTGGGCTATTGTTTGGCATTGTTGTGGTTGAGGTGGTACTAGCAAACCTTGTCCATCAATTTGATTGGTCATTGCCTGATGGAGTAACAGGGGAGGACTTGGACATGACTGAAACTGTTGGCCTTACCTCTCATAAAAAATTTCCTCTCCTGGCAATGGCAACCAAATATGAGACTATGGTTTTCTTGAGTATCTTTCTGGTCTTCCTTTCTCTTCTATTTCTCATCAAATGGTATTCCAACTCAGCAACCAGCAGCAAGAACTCACCCCCTTCACCTCCAAGAATTCCTCTACTTGGTAATCTCCATCAACTTGGATTGTTCCCACACCGCACACTCCTATCTTTAGCTCAAAAGTATGGTCCTTTAATGTTGCTTCATTTTGGGAAGGTGCCAGTACTTGTGGTCTCCTCTGCTGATGCAGCCTCTATGGTAATGAAGACCCATGACTTGGTTTTCTGTGACAGACCAGGGCTTAAAATATTTGGCATCCTGTTATATGGCTTCAAAGATGTGACAAGTGCTCCATATGGTGAGCACTGGAGACAAGTAAGGAGTGTTAGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCAATCTTTTCGTCGTGTGAGAGAAGAGGAAACTGCTAGAATGATGGAAAAAATTAAGGAGTGTTCTTCTTCTTCCTTGCCGGTGAATTTATCTGAGTTGTGCTCCACACTTACTAATGATATAATATGTAGGGTGGCTTTGGGAAAGAGATACCGTGAAGAAGGAGGGAGGAAGTTTCAGCATCTGTTATTGGAGTTTATGGAGTTATTAGGTGCTGTCTGTATAGGGGACTATATACCATGGCTTGATTGGTTGAGTAAGGTTAATGGTATGTATGGTAGAGCAGAGAGAGTGACCAAACATTTCGATGAGTTTATAGATGAAGTAATTGAGGAGCACATTAATTGTAGATCCAGGAATAAAGATAGTGAGGACCAGAATGATTTCATGGATGTTTTGCTTTCGATCCAAAAGACAAACGCTATTGGCTTCCCAATTGATAGAACAACAATAAAGGGTTTGATAGTGGACATGTTTGTTGCAGGTACTGACACTACCTACACAGTCCTGGAGTGGGCACTCACAGAACTGTTAAGGCACCCAGTTGTGATGCATAAATTGCAAGATGAGGTGAGAAGTGTGGTTGGTAACAAAACTCACGTAACTGAGGATGATTTGGGTCCCATGAAGTACTTGAAGGTTGTGATAAAAGAAACTCTTCGGCTTCATACCCCAGCTCCCTTACTACTTCCTCGGAAATCCATGAAAGATATCAAACTGAATGGCTATGACATTGCAGCTGGCACGCATGTATTAGTAAATGCTTGGGGAATTTCAAGAGACCCTTCATATTGGGACCAACCTCTAAAGTTTAAGCCAGAAAGGTTCCTCAACAGTTCTATAGATTTCAAAGGACATGATTTTGAATTTACCCCCTTTGGAGCTGGAAGGAGGGGTTGTCCTGGAATGTTGTTTGCAACTGCTGTCATTGAGATGGTAATAGCAAACCTTGTCCACCAATTTGATTGGACATTGCCTGGTGGAGTAACAGGGGAGGACTTGGACATGACTGAAACTGCTGGCATTGCCTGTCATAGAAAATACCCTCTCCTGGCAGTAGCAACAAAATATGAAAAATAA 2973 0.4188 MVFLTIFLVFLSLLFIIKWYSNSATSSKNSPPSPPRIPLLGNLHQLGSLPHRTLQSLAQKYGPLMLLHFGKVPVLVVSSADAASMVMKSHDLVFCDRPPRKIFDIMLYGFKDMATAPYGEYWRQVRSVCVLHLLSNKRVQSFRRLREEETSRMMEKIKECSSSSLPVNLSELCSTLTNDIICRVALGKRYSEGGTKFQHLLSEFMEIVGSISIGDFIPWLDWLSKVNGFYNKAERVARHFDEFIDELIEEHINYSTEDQNDFVDVLLSIQKTNAIGFSIDKTSIKALILDMFVAGTDTSYTVLEWALTELLRHPVVMHKLQDEVRNVVGNRTHVTEDDLGQMKYLKVVIKETLRLHTPLPLLVPRRCMNDIKLNGYDIAAGTQIIVNAWGIARDPSYWDQPLEFKPERFLNSSIDFKGHDFEFIPFGAGRRGCPGLLFGIVVVEVVLANLVHQFDWSLPDGVTGEDLDMTETVGLTSHKKFPLLAMATKYETMVFLSIFLVFLSLLFLIKWYSNSATSSKNSPPSPPRIPLLGNLHQLGLFPHRTLLSLAQKYGPLMLLHFGKVPVLVVSSADAASMVMKTHDLVFCDRPGLKIFGILLYGFKDVTSAPYGEHWRQVRSVSVLHLLSNKRVQSFRRVREEETARMMEKIKECSSSSLPVNLSELCSTLTNDIICRVALGKRYREEGGRKFQHLLLEFMELLGAVCIGDYIPWLDWLSKVNGMYGRAERVTKHFDEFIDEVIEEHINCRSRNKDSEDQNDFMDVLLSIQKTNAIGFPIDRTTIKGLIVDMFVAGTDTTYTVLEWALTELLRHPVVMHKLQDEVRSVVGNKTHVTEDDLGPMKYLKVVIKETLRLHTPAPLLLPRKSMKDIKLNGYDIAAGTHVLVNAWGISRDPSYWDQPLKFKPERFLNSSIDFKGHDFEFTPFGAGRRGCPGMLFATAVIEMVIANLVHQFDWTLPGGVTGEDLDMTETAGIACHRKYPLLAVATKYEK. 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04848 990 SUPERFAMILY Cytochrome P450 523 986 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 Gene3D Cytochrome P450 15 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 Gene3D Cytochrome P450 508 985 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Seca12g04848 990 PRINTS P450 superfamily signature 792 809 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS P450 superfamily signature 845 856 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS P450 superfamily signature 922 931 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 550 569 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 668 686 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 781 798 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 801 827 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 885 909 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 921 931 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 931 954 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PRINTS E-class P450 group I signature 844 862 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 FunFam Cytochrome P450 83B1 18 486 - -
Seca12g04848 990 CDD CYP71-like 552 981 - -
Seca12g04848 990 Pfam Cytochrome P450 31 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 Pfam Cytochrome P450 523 976 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04848 990 PANTHER CYTOCHROME P450 71B11-RELATED 12 488 - -
Seca12g04848 990 CDD CYP71-like 60 483 - -
Seca12g04848 990 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 924 933 IPR017972 GO:0005506|GO:0016705
Seca12g04848 990 FunFam Cytochrome P450 83B1 510 984 - -
Seca12g04848 990 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04848 Seca-Chr12 132558928 132570204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04848 493 988 Cytochrome P450 AT3G48280 49.296 8.10e-172 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04848 - - pvy:116136695 799.66