Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04840 ATGATGGAATATATTAAGGAGTCTTCTTCTTCTTCTTCCTTGGCGGTGAATTTATCTGAGTTGTGCTCTGAAGTTACGAATGATATAATATGTAGAGCGGCTCTGGGAAAGAGATACCGTGAAGAAGGAGGGAGGAAGTTTCAGCATCTGTTATTGGAATTTGAGGAGTTATTAGGTTCTTTCTCTATAGGGGACTATATACCTTGGCTTGATTGGTTGAGTAAGGTTAATGGTTTCTATAGCAGAGCAGAGAGAGTGGCCAAACATTTGGATGAGTTTATGGAAGAAGTAATTGAGGAGCACATTAACTGTAATATTGAGGACCAGAATGATTTTGTGGACGTTTTGCTTTCGATCCAAAAGACAAACACTATTGGCTTCTCAATTGATAGAACTGCAATAAAGGCTTTGATACTGGTAAGAATATCATTTATTTATTTATATTTTTCATTCATCCTAGAGTGGGCAATGACAGAACTTTTAAAGAACCCAATTGTGATGCATAAATTGCAAGATGAGGTGAGAAGTGTGGTTGGTAACAAAACTCACATAACTGATGAGGATTTGGGTCACATGAAGTACTTGAAGGCTGTGATCAAAGAAACTCTTCGCCTCCATACACCAGTTCCCTTACTACTTCCTCGGAAATCCATGAAAGATATCAAACTGAATGGATATGACATTGCAGCTGGGACACAGGTAATAGTAAATGCTTGGGGAATTGCAACAGACCCTTCATATTGGGACCAACCTCTGGAGTTTAAACCAGAAAGGTTCCTCAACAGTTCTATTGATTTCAAAGGACATGATTTTGAATTTATCCCCTTTGGAGCTGGAAGGAGGGGTTGCCCTGGATTGCTCTTTGCTATTGTTGTGAATGAGGTGGTGCTAGCAAACCTTGTTCCCCAATTTGATTGGACATTGCCTGGTGGAGTAACGGGGGAGGATTTGGATATGACTGAAACTGTTGGCCTTACCTCTCATAGAAAATGTCCTCTCCTAGCAGTTGCAAACAAATATAATAAAAATGACTTCACTATCTCTCTGGTCTTCCTTTCTCTTTTATTCATCATCAAATGGTATTCTAATTCTGCAACCAGCAAGAACTCACCCCCTTCACCTCCAAGAATTCCTCTACTTGGTAACCTCCACCAACTTGGCTTGCTCCCACACCGCACACTCCAATCTTTAGCTCAAAAATATGGTCCTTTAATGTTGCTTCATTTCGGGAAGGTGCCAGTACTTGTGGTCTCCTCTGCTGATGCAGCCTCTATGGTAATGAAAATCCATGACTCTGTTTTCTGTGACAGGCCACAGCGAAAAATATGTGATATTCTGTTATATGGCTCAAAAGATATAGCAACCGCTACATATGGTGAGTACTGGAGAAATATAAGGAGTGTCTGTGTGTTACACCTTCTGAGTAACAAAAAGGTTCAATCTTTTCGTCATGTGAGAGAGGAGGAAACTGCTAGAATGATGGAATATATCAAGGGGTGTTCTTCTTCTTCTTCCTTGCCGGTGAATTTATCTGAGTTGTGCTCTGCAGTTACGGATGATATAATAAGTAGAGTGGCTTTGGGAAAGAGATACCGTGAAGAAGGAGGGAGGAAGTTTCAGCATCTGTTATTGGAATTTGGGGAGTTATTAGGTTCTTTCTCTATAGGGGATTATATACCTTGGCTTGATTGGTTGAGTAAGGTTAATGGTATGTATGGTAGAGCAGATAGAGTTGCCAAACATTTGGATGAGTTTATAGATGAAGTGATTGAGGAGCACATTAGTTGTCGGTCAAGGAATAGCAATAGTGAAGACCAGAATGATTTTGTGGATGTTTTGCTTTCGATCCAAAAGACAAACTCTATTGGCTTCTCAATTGATAGAACTGCAATAAAGGCTTTGATATTGGTAAGCATATCATTTATTTATTTATAA 1935 0.3964 MMEYIKESSSSSSLAVNLSELCSEVTNDIICRAALGKRYREEGGRKFQHLLLEFEELLGSFSIGDYIPWLDWLSKVNGFYSRAERVAKHLDEFMEEVIEEHINCNIEDQNDFVDVLLSIQKTNTIGFSIDRTAIKALILVRISFIYLYFSFILEWAMTELLKNPIVMHKLQDEVRSVVGNKTHITDEDLGHMKYLKAVIKETLRLHTPVPLLLPRKSMKDIKLNGYDIAAGTQVIVNAWGIATDPSYWDQPLEFKPERFLNSSIDFKGHDFEFIPFGAGRRGCPGLLFAIVVNEVVLANLVPQFDWTLPGGVTGEDLDMTETVGLTSHRKCPLLAVANKYNKNDFTISLVFLSLLFIIKWYSNSATSKNSPPSPPRIPLLGNLHQLGLLPHRTLQSLAQKYGPLMLLHFGKVPVLVVSSADAASMVMKIHDSVFCDRPQRKICDILLYGSKDIATATYGEYWRNIRSVCVLHLLSNKKVQSFRHVREEETARMMEYIKGCSSSSSLPVNLSELCSAVTDDIISRVALGKRYREEGGRKFQHLLLEFGELLGSFSIGDYIPWLDWLSKVNGMYGRADRVAKHLDEFIDEVIEEHISCRSRNSNSEDQNDFVDVLLSIQKTNSIGFSIDRTAIKALILVSISFIYL. 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04840 644 FunFam Cytochrome P450 83B1 1 336 - -
Seca12g04840 644 SUPERFAMILY Cytochrome P450 371 636 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 Pfam Cytochrome P450 371 635 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 Pfam Cytochrome P450 1 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS P450 superfamily signature 162 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS P450 superfamily signature 274 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS P450 superfamily signature 197 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 347 636 - -
Seca12g04840 644 PRINTS E-class P450 group I signature 283 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS E-class P450 group I signature 273 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS E-class P450 group I signature 25 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS E-class P450 group I signature 153 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 PRINTS E-class P450 group I signature 237 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 Gene3D Cytochrome P450 364 639 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 Gene3D Cytochrome P450 1 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04840 644 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 276 285 IPR017972 GO:0005506|GO:0016705
Seca12g04840 644 SUPERFAMILY Cytochrome P450 2 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04840 Seca-Chr12 132062857 132074014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04840 368 636 Cytochrome P450 AT3G48270 51.301 2.69e-91 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04840 - - bvg:104908581 594.349