Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04838 ATGTCAACCTTTCTGCCAAGTTCTATTCCACAGGAAAATTTCCACTCATTCCCTATGCTTTACTTAACTATCTTTCTGGTCTTACTTTCTCTTCTAGTCATTATTAAATGGTATTCTAATTCTGGAACAAGCAAGAACTCACCCCCTTCACCTCCAAGAATTCCTATACTTGGTAATCTTCATCAACTTGGTTTGTTCCCACACCGCACACTCCAATCTTTTGCTCAAAACTATGGTCCTTTAATGTTGCTTCATTTTGGGAAGGTGCCAGTACTTGTGGTCTCCTCTGCTGATACAGCCTCTATGGTAATGAAAACCCATGACTTGGTCTTCTCTGACAGGCCACAGCGTAAAATATTTGATATCCTGTTATATGGCTCCAAAGATGTGGCAACTGCTACATATGGTGAGTACTGGAGACAAATAAGGAGTGTCTGTGTGTTACAGCTTCTGAGTAACAAAAGGGTTCAATCTTTTCGTCGTGTGAGAGAGGAGGAAACTGCAAGAATGATGGAATATATTAAGGAGTCTTCTTCTACTTCCTTGCCGGTGAATTTATCTGAGTTGTGCTCAACAGTTACGAATGACATAATATGTAGGGTGGCTTTGGGAAAGAGATACCGTGAAGAAGGAGGGAGGAGGTTTCAGCAGCTGCTATTGGAGCTTGGGGAGTTATTAGGTTCTATCTCTATAGGGGACTATATACCTTGGCTTGATTGGTTGGGTAAGGTTAATGGAATATATGGTAGAGCAGATAGAGTGGCAAAACATTTGGATGAGTTTATAGATGAAGTAATTGAGGAGCACATTAGTTGTTGGTCAAGGAATAGCAAGGATGGGCATGTTGATTTAGATAGTGAAGACCAGAATGATTTTGTGGACGTTTTGCTTACCATCCAAAACACAAGTTCTATTGGCTTCCCAATTGATAGAACTGCAATAAAAGCTTTGATACTGGCTGTGGTGAATTGCTGA 975 0.4062 MSTFLPSSIPQENFHSFPMLYLTIFLVLLSLLVIIKWYSNSGTSKNSPPSPPRIPILGNLHQLGLFPHRTLQSFAQNYGPLMLLHFGKVPVLVVSSADTASMVMKTHDLVFSDRPQRKIFDILLYGSKDVATATYGEYWRQIRSVCVLQLLSNKRVQSFRRVREEETARMMEYIKESSSTSLPVNLSELCSTVTNDIICRVALGKRYREEGGRRFQQLLLELGELLGSISIGDYIPWLDWLGKVNGIYGRADRVAKHLDEFIDEVIEEHISCWSRNSKDGHVDLDSEDQNDFVDVLLTIQNTSSIGFPIDRTAIKALILAVVNC. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04838 324 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 24 320 - -
Seca12g04838 324 Pfam Cytochrome P450 48 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04838 324 SUPERFAMILY Cytochrome P450 46 320 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04838 324 Gene3D Cytochrome P450 41 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04838 324 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04838 324 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04838 324 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04838 Seca-Chr12 132050289 132051550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04838 14 322 Cytochrome P450 AT3G48320 49.515 2.90e-99 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04838 - - gmx:100819183 431.409