Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04724 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCCAAACGCCACTACACGCTTCAGCATCATCACCCAAGTTCCCATTTAGATCGGTTGGGAATCGAGGATTTTGATGTGGAAGAAGAGGTGAGACCAGATTTCCCGTGTCCCTATTGTTACGAAGACTTTGACATCGCCTCCTTGTGTTCTCATCTTGAAGATGAACATTCGTGTGAATCAAAAGTCACGATTTGTCCTATATGCTCAGTTAAAGTTGCACGGGACATGTTGAGTCACATAACGCTGCAACATGGGCATTTGTTTAAGATATCCTTTATACTGTTGTTTTGA 327 0.4465 MDSDFWTSRLAAAKRHYTLQHHHPSSHLDRLGIEDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTICPICSVKVARDMLSHITLQHGHLFKISFILLF. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04724 108 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 101 IPR033347 -
Seca12g04724 108 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Seca12g04724 108 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 96 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04724 Seca-Chr12 128638765 128642263 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca12g04724 zf-Di19 6.8e-21 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04724 - - gmx:100792230 211.075