Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04720 ATGTTGTGGCTGCATTCCCCGTTTCCACACAGCGCTATGGATCTGGATAATCTTCTTTCACAGTCAACCTTGTCATTCACAATCTATGGCACCCTATTGTGTCTATTCCTTCTATTTTGGCTACTGAGAAGCCGCACTTATGCAACTACAAAGGCACCGCCAGAAGCTGGCGGTGCTTGGCCTTTAATCGGACACCTCCACCTCTTAGGTGGCCCACAGCCACCACACGTTACATTAGGAAACATGGCAGACAAACACGGACCAGTCTTCACGTTGCGTATGGGTGTTCACCGAACCTTGGTGGTAAGCAGTTGGGAAATGGCAAAACAGTGTTTTACCGTAAACGACAAAGCGTTTGCTTCCCGTCCCAAATCTGTAGCCATGGAAATCTTGGGATACAACTTTTCCATGTTAGGATTCAGTCCCTACGGTTCCTATTGGCGCCACGTGCGCAAGATAGCAACCCTGGAGGTCCTCTCTTCCCATCGAATAGAGATGCTCAAAAACATCATGGAATCTGAGGTGAAGGCTGCGATGAAAGAAAGTTACGATTATTGGCTAAAGATGAATAAGAGTGGTTCTGGAAATGCAGTGACGGAGATGAAGAAATGGTTTGGGAACATAACACTCAACGTTATGTTCAGAACGGTTGTGGGAAAACGGTTAGTTGGGGCGGGTTGTGATGGCGATGAGGAAGAGAACGAACGGATCTCAAAAGCAGTTAGGGACTTCTTTGATCTGAGTGGGTCATTTGCTGTCTCCGATGCGATGCCGTTTTTGAGATGGTTGGATTTGGATGGACAAGAGAAACAAATGAAAAAGACTGCAAAAGAGTTAGATGACTTCATTCAAGTTTGGCTTGATCAACACAAACGCAACAGGAAAAGTACTGCTTCTGGGCGGGAACCGAAGGGTAACCTTGACTTCATGGACGTGCTTATTTCCACCGTTGATGATGGAGGTTTTGACCAACATGATGCCGATACTATAATCAAGGCCACATGCCTGGCACTTATTGTAGCTGGCACAGACACTACAACTGGGTCATTGACATGGGCTCTCTCATTACTTCTCAACAACCGTGAAGCCCTTAACAAGGTCATACATGAATTAGACACGCAAATTGGTAGAGAAAAAATGGCAGTGGAGTCAGACTTTAAGAAGTTGGAATATCTCCAAGCCATCATCAAGGAAACATTACGCTTGTACCCAGCTGCACCACTTAATGTGCCTCATGAGTCCATGGAAGATTGTATTGTGGGTGGATTCCATGTGCCTGCTGGCACACGTCTTTTAACTAACCTTTCAAAAATTCAACGAGATCCCTTGTTATATTCCAATCCCTTAGAGTTCTGCCCAGAAAGATTTCTCACAACCCACAAGGATGTTGATCTCAAAGGTCAACATTTTGAATTGATTCCATTCGGTGCAGGGAGAAGAATGTGTCCAGGACTCTCATTTGGCCTTCAACTAATGCAAATAACACTTGCTACTCTTCTACATGGTTTTGATATAACAACTCTTGATGGGGGAGCGGTTGATATGCATGAACAAAGCGGGTTAACCAACATCAAAGCCACTCCGCTTCATGTTATTCTTACGCCACGTCTATCTACTCAAGTTTATGGTCAAAATTAA 1638 0.4481 MLWLHSPFPHSAMDLDNLLSQSTLSFTIYGTLLCLFLLFWLLRSRTYATTKAPPEAGGAWPLIGHLHLLGGPQPPHVTLGNMADKHGPVFTLRMGVHRTLVVSSWEMAKQCFTVNDKAFASRPKSVAMEILGYNFSMLGFSPYGSYWRHVRKIATLEVLSSHRIEMLKNIMESEVKAAMKESYDYWLKMNKSGSGNAVTEMKKWFGNITLNVMFRTVVGKRLVGAGCDGDEEENERISKAVRDFFDLSGSFAVSDAMPFLRWLDLDGQEKQMKKTAKELDDFIQVWLDQHKRNRKSTASGREPKGNLDFMDVLISTVDDGGFDQHDADTIIKATCLALIVAGTDTTTGSLTWALSLLLNNREALNKVIHELDTQIGREKMAVESDFKKLEYLQAIIKETLRLYPAAPLNVPHESMEDCIVGGFHVPAGTRLLTNLSKIQRDPLLYSNPLEFCPERFLTTHKDVDLKGQHFELIPFGAGRRMCPGLSFGLQLMQITLATLLHGFDITTLDGGAVDMHEQSGLTNIKATPLHVILTPRLSTQVYGQN. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04720 545 Gene3D Cytochrome P450 40 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Seca12g04720 545 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 PANTHER CYTOCHROME P450 82C3-RELATED 33 542 - -
Seca12g04720 545 SUPERFAMILY Cytochrome P450 59 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04720 545 FunFam Cytochrome P450 82C4 43 534 - -
Seca12g04720 545 CDD CYP82 87 536 - -
Seca12g04720 545 Pfam Cytochrome P450 56 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04720 Seca-Chr12 128484210 128489414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04720 26 542 Cytochrome P450 AT4G31940 47.519 1.83e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04720 - - gmx:100778017 776.548