Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04715 ATGTGCAGCTTCGTGTCGGTTATCCATTTATTAGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGGGCTCCTATAGACTCCAACCTGCTGAAGTTGCTCATTCCTGTGGCTGTGTGCCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCAGCAGTTGCTGTTTCTTTCACACATACCATCAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGTCAATCAATACCCATCACTTTATGGCTGTCACTGGCTCCTGTTGTTATTGGTGTGTCAATGGCCTCATTGACAGAGCTCTCATTCAACTGGGTCGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTTACATACCGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCTGCCGTAATTGTGGAAGGACCTGCACTATTGAAGCACGGCTTCAATGATGCAATTGCTAAAGTTGGTATGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGGATGTTTTACCACCTCTACAACCAGGTGGCTACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGCAACGTACTGAAACGTGTATTTGTGATTGGATTTTCAATAATAGTCTTCGGTAACAAGATTTCCACCCAAACTGGTATAGGAACAGGTATTGCAATCGCTGGAGTTGCACTCTACTCCTTCATCAAAGCCAAGATGGAGGAAGAGAAGCGACAAGCGAAAGCAGCATAA 831 0.4525 MCSFVSVIHLLVGVVYCLVSWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAVIVEGPALLKHGFNDAIAKVGMVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTGIAIAGVALYSFIKAKMEEEKRQAKAA. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04715 276 Pfam Triose-phosphate Transporter family 3 260 IPR004853 -
Seca12g04715 276 SUPERFAMILY Multidrug resistance efflux transporter EmrE 16 109 - -
Seca12g04715 276 SUPERFAMILY Multidrug resistance efflux transporter EmrE 192 261 - -
Seca12g04715 276 PANTHER SOLUTE CARRIER FAMILY 35 4 267 - -
Seca12g04715 276 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 3 270 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04715 Seca-Chr12 128343330 128347825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04715 4 274 Antiporters AT5G46110 90.775 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04715 K15283 - gmx:732611 508.834