Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04694 ATGTTGCTGGAAGTTGCAGTAGCGTTATTGGTGATAGCACTGTTCATACACTTGCGTCCCACACCATCTGCAAAATCAAAGGCCCTTCGCCACCTCCCTAACCCTCCTAGCCCCAAACCTCGTCTCCCTTTCGTAGGACACCTTCACCTTTTGGACAATCCTCTGCTCCATCACTCCCTCATCCGTCTCGCTGATAAATATGGTCCCTTATACTCTCTCTACTTTGGCTCCATGCCTACCATTGTTGCCTCCACCCCTGAATTGTTCAAACTCTTCCTTCAAACCCATGAGGCTTCTTCCTTCAACACAAGGTTCCAAACCTCTGCCATCAGGCGCCTCACTTATGACAACTCTGTTGCTATGGTCCCCTTTGGACCTTATTGGAAGTTCATCAGGAAGCTCATCATGAACGACCTCCTCAATGCCACCACCGTCAACAAGTTGAGACCATTGAGAAGCCAAGAAATCCGAAAGGTTCTCAAGGTGATGGCTCAGAGTGCGGAATCTCAACAGCCACTTAATGTCACAGAAGAGCTGCTCAAGTGGACAAACAGCACCATCTCAAGGATGATGTTGGGTGAAGCTGAAGAGATTAGGGACATCGCTCGTGACGTCCTTAAGATCTTTGGGGAATACAGTCTTACTGACTTCATTTGGCCATTGAAGAAGCTCAAGGTTGGACAATATGAGAAGAGAATTGATGACATATTTAACAGATATGACCCCGTCATTGAAAAGGTCATCAAGAAACGCCAAGAGATCAGGAAAAGGAGAAAGGAGGGAAATGGAGAAACAGACAAGGATGAACAGAGTGTAGTTTTTCTTGATACTTTGCTTCAATTCGCTGAGGATGAGACCATGGAGATCAAAATTACCAAGGAACAGATCAAGGGTCTTGTTGTGGATTTCTTTTCAGCAGGGACCGATTCCACAGCTGTGGCTACAGATTGGGCATTGTCAGAGCTCATCAACAATCCCAAGGTGTTTCAAAAGGCTCGACAGGAGATCGATAGTGTTGTGGGAAAAGATAGACTCGTTGATGAATCAGATATTCAGAACCTTCCTTACATTAGAGCCATTGTGAAGGAGACATTCCGTATGCACCCGCCACTACCTGTCGTCAAAAGAAAGTGTGTGCAAGAATGTGAGATTGATGGGTATGTGATCCCAGAGGGAGCATTGATACTTTTCAATGTGTGGGCCGTAGGAAGAGATCCAAAATACTGGGAAAAGCCATTAGAATTTCGTCCTGAGAGGTTCTTAGAAAGTGGAGCTGAAGGGGAAGCAGGCCCAATTGATCTTAGGGGACAACATTTCCAACTTCTTCCATTTGGGTCTGGAAGGAGGATGTGCCCTGGAGTCAATTTGGCTACTGCAGGAATGGCCACATTTCTTTCATCAGTTATCCAATGCTTTGATTTGCAGGTAGTGGGTCCACAAGGCCAAATATTGAAAGGAAATGATGCCAAAGTTAGCATGGAAGAGAGACCCGGTCTCACTGTTCCAAGGGCACACAATCTCATGTGCGTTCCGCTTGCTAGATCAAGCATTGCAGCTAAACTCATTTCCTCATAA 1575 0.459 MLLEVAVALLVIALFIHLRPTPSAKSKALRHLPNPPSPKPRLPFVGHLHLLDNPLLHHSLIRLADKYGPLYSLYFGSMPTIVASTPELFKLFLQTHEASSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRSQEIRKVLKVMAQSAESQQPLNVTEELLKWTNSTISRMMLGEAEEIRDIARDVLKIFGEYSLTDFIWPLKKLKVGQYEKRIDDIFNRYDPVIEKVIKKRQEIRKRRKEGNGETDKDEQSVVFLDTLLQFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATDWALSELINNPKVFQKARQEIDSVVGKDRLVDESDIQNLPYIRAIVKETFRMHPPLPVVKRKCVQECEIDGYVIPEGALILFNVWAVGRDPKYWEKPLEFRPERFLESGAEGEAGPIDLRGQHFQLLPFGSGRRMCPGVNLATAGMATFLSSVIQCFDLQVVGPQGQILKGNDAKVSMEERPGLTVPRAHNLMCVPLARSSIAAKLISS. 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04694 524 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 CDD CYP93 68 511 - -
Seca12g04694 524 SUPERFAMILY Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04694 524 PANTHER STEROID 21-HYDROXYLASE-RELATED 10 507 - -
Seca12g04694 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Seca12g04694 524 FunFam Cytochrome P450 family protein 26 509 - -
Seca12g04694 524 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04694 Seca-Chr12 127496122 127498002 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04694 32 516 Cytochrome P450 AT5G06900 35.685 2.54e-112 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04694 - - ag:BAA76380 910.983