Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04691 ATGTTGCTGGAAATTGCAGTAGCATTATTGGTGATAGCACTGTTCATACACTTGCGTCCCACACCATCTGCAAAATCAAAGGCCCTTCGCCACCTTCCCAATCCTCCTAGCCCCAAACCTCGTCTCCCTTTCGTAGGACACCTTCACCTTTTGGACAATCCTCTGCTCCATCACTCCCTCATCCGTCTCGCTGATAAATATGGTCCCTTATACTCTCTCTACTTTGGCTCCATGCCTACCATTGTTGCCTCCACCCCTGAATTGTTCAAACTCTTCCTTCAAACCCATGAGGCTTCTTCCTTCAACACAAGGTTCCAAACCTCTGCCATCAGGCGCCTCACTTATGACAACTCTGTTGCCATGGTCCCCTTTGGACCTTACTGGAAGTTCATCAGGAAGCTCATCATGAACGACCTCCTCAATGCCACCACCGTCAACAAGTTGAGACCCCTCAGGAGCCAAGAAATCCGAAAGGTTCTCAAGGTGATGGCTCAGAGTGCGGAATCTCAAGAACCCCTTAATGTCACAGAGGAGCTGCTCAAGTGGACAAACAGCACCATCTCAAGGATGATGTTGGGTGAAGCTGAAGAGATTAGGGACATCGCTCGTGACGTCCTTAAGATCTTTGGGGAATACAGTCTCACTGACTTCATTTGGCCATTGAAGAAGCTCAAGGTTGGACAATATGAGAAGAGAATTGATGACATATTTAACAGATATGACCCCGTCATTGAAAAGGTCATCAAGAAACGCCAAGAGATCAGGAAAAGGAGAAAGGAGGGAAATGGAGAAACAGACAAGGATGAACAGAGTGTAGTTTTTCTTGATACTTTGCTTCAATTCGCTGAGGATGAGACCATGGAGATCAAAATTACCAAGGAACAGATCAAGGGTCTTGTTGTGGATTTCTTTTCAGCAGGGACCGATTCCACCGCTGTGGCTACAGATTGGGCATTGTCAGAGCTCATCAACAATCCCAGGGTGTTTCAAAAGGCTCGACAGGAGATCGATAGTGTTGTGGGAAAAGATAGACTCGTTGATGAATCAGATATTCAAAACCTTCCTTACATTAGAGCCATTGTGAAGGAGACATTCCGTATGCACCCGCCACTACCTATCGTCAAAAGAAAGTGCGTGCAAGAATGTGAGATTGATGGGTATGTGATCCCAGAGGGAGCATTGATACTTTTCAATGTGTGGGCCGTAGGAAGAGATCCAAAATACTGGGAAAAGCCATTAGAATTCCGTCCGGAGAGGTTCTTAGAAAGTGGAGCTGAAGGGGAAGCAGGCCCAATTGATCTTAGGGGACAACATTTCCAACTTCTTCCATTTGGGTCTGGAAGGAGGATGTGCCCTGGAGTCAATTTGGCTACTGCAGGAATGGCCACATTTCTTTCATCAGTTATCCAATGCTTTGATTTGCAGGTAGTGGGTCCACAAGGCCAAATATTGAAAGGACATGATGCCAAAGTTAGCATGGAAGAGAGACCCGGTCTCACTGTTCCAAGGGCACACAATCTCATGTGCATTCCACTTGCTAGATCAAGCATTGCAGCTAAACTCATTTCCTCATAA 1575 0.4629 MLLEIAVALLVIALFIHLRPTPSAKSKALRHLPNPPSPKPRLPFVGHLHLLDNPLLHHSLIRLADKYGPLYSLYFGSMPTIVASTPELFKLFLQTHEASSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRSQEIRKVLKVMAQSAESQEPLNVTEELLKWTNSTISRMMLGEAEEIRDIARDVLKIFGEYSLTDFIWPLKKLKVGQYEKRIDDIFNRYDPVIEKVIKKRQEIRKRRKEGNGETDKDEQSVVFLDTLLQFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATDWALSELINNPRVFQKARQEIDSVVGKDRLVDESDIQNLPYIRAIVKETFRMHPPLPIVKRKCVQECEIDGYVIPEGALILFNVWAVGRDPKYWEKPLEFRPERFLESGAEGEAGPIDLRGQHFQLLPFGSGRRMCPGVNLATAGMATFLSSVIQCFDLQVVGPQGQILKGHDAKVSMEERPGLTVPRAHNLMCIPLARSSIAAKLISS. 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04691 524 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 CDD CYP93 68 511 - -
Seca12g04691 524 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 SUPERFAMILY Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04691 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Seca12g04691 524 PANTHER STEROID 21-HYDROXYLASE-RELATED 10 508 - -
Seca12g04691 524 FunFam Cytochrome P450 family protein 26 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04691 Seca-Chr12 127479120 127481488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04691 32 516 Cytochrome P450 AT5G06900 35.887 1.74e-112 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04691 - - ag:BAA76380 909.827