Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04674 ATGAAGAAGGTTTCCAAGACCAGCTGCAAGTCTGCATCACACAGGCTCTTTAAGGATAAGGCTAAGAATCGTGTTGATGACCTGCAGCTGATGTTCCTGGATCTGCAGTTTGCCAGGAAGGAGAGCCGTACAGTTGATGCTGCAGTGCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCCTCTCCTGCTTCTTCTTTGCAGCAAGGTGGCAGCCTTGGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAACTGCACCTAAGCCTGAACCTAACGATCAGACTCTGCAGGTGCAGGCTAGGGGTAAGGTCATATTCCAAGAGGGCCAACAGCAACATGATTTCCCATTGGTTGATGAGTGCAAACACTCTACCCCAGGAGTTCAAAATGTGGCAGCCAGCAACCCAGATGTGTCTGCTTTAGAATATCATCAGTTTGATTTGCAGCAGGACTTCGATCGTAGCTTTTATACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGGTGCTATTCCTCATATATCTAGTTATTTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAGTGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTGAATGAAGGGCCTCCAGGCATGGCCCCAGTTCTTCGACCTGGTGGCATTGGTTTGAAGGACAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGGAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTGATAAATGAATTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTAAACCATTTTGAGTGGCACCTTTATGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGATTGGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCCAAGGCAAAGGTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCTGCTGAGTTTCCAGTTCCACCTGATAACAAAAGACCTGCCAAAGGCAGAGCCAAAATCAATGCCAAAGTTGGCATAGGTGGAGTCTATTCGGCTTCACACAGAGTGACTCCACTAAATGGAACATATGAGTATGGGTTAGCTTCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1446 0.462 MKKVSKTSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLTAPKPEPNDQTLQVQARGKVIFQEGQQQHDFPLVDECKHSTPGVQNVAASNPDVSALEYHQFDLQQDFDRSFYTGFNGTGYCEEGAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKVTNDSVADLQKQMGKLSAEFPVPPDNKRPAKGRAKINAKVGIGGVYSASHRVTPLNGTYEYGLASPYDYLVENMGDYYGT. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04674 481 PANTHER TRANSCRIPTION FACTOR VOZ1 1 476 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04674 Seca-Chr12 126943656 126949364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04674 3 479 VOZ-9 Transcription Factor Family AT1G28520 70.994 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Seca12g04674 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04674 - - gmx:100798565 904.434