Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g04673 | ATGGAGTGCCCGTACGCGTCTCGCGGATCATGGACTCCATTGGGGTCACAATTGCAGCTTACACCAGGAAATTGTTTAGAAATCCGCATTGCAATTTGGTCTCACACCAATACAATGTTATTTTCAACAGAACCTCGCACTTTCAAATACATAGAAACTGAAGGGTTTTTACAAGAAATCAGAGATTTCATAATAACATCCCTTAGCAGCCCACAATTTGGCTCTGTATCTGTCCAACAAGCAACAGATGTGGCAATAACTGCAATTCAACGAGGGTTCCAGTTTGACCACAACCTTGCTAATGCTAATTCTGAATCATTACCCCAATCCAAGGAGTTGTCTTTACTTTTGGGAGTCAGGCTACCTGAACCTACTTATACACATCCCGCATCTAAGGAAGCCATAAAAAAGTCACTGAAGAAAGTTAAGGTTACTGAACTGAATCAGTGTTGTGCTATTTGCATGGAGGAGTTTCAAATCGGTGGTGCTGATGGTAATAACAAGGCAGATGAGAGCTACTCAATGCCCTGTTCTCATGTGTTTCATCCAACCTGTATTGTGACCTGGTTGAACAGGAGTAATATGTGTCCATTGTGTCGCTATCCTTTGCCAACTGTCAATGAAGAGATGAATGATAAGGTGACCTGTTGCACTTTTATTAGTTCTATAATTAGGTCCATTTTTCGTTTTCTCTAA | 696 | 0.4109 | MECPYASRGSWTPLGSQLQLTPGNCLEIRIAIWSHTNTMLFSTEPRTFKYIETEGFLQEIRDFIITSLSSPQFGSVSVQQATDVAITAIQRGFQFDHNLANANSESLPQSKELSLLLGVRLPEPTYTHPASKEAIKKSLKKVKVTELNQCCAICMEEFQIGGADGNNKADESYSMPCSHVFHPTCIVTWLNRSNMCPLCRYPLPTVNEEMNDKVTCCTFISSIIRSIFRFL. | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g04673 | 231 | SMART | ring_2 | 151 | 199 | IPR001841 | - | |
Seca12g04673 | 231 | ProSiteProfiles | Zinc finger RING-type profile. | 151 | 200 | IPR001841 | - | |
Seca12g04673 | 231 | Pfam | RING-H2 zinc finger domain | 150 | 200 | IPR024766 | GO:0008270 | |
Seca12g04673 | 231 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 121 | 206 | IPR013083 | - | |
Seca12g04673 | 231 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 90 | 204 | - | - | |
Seca12g04673 | 231 | SUPERFAMILY | RING/U-box | 144 | 207 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g04673 | Seca-Chr12 | 126931292 | 126931987 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g04673 | 129 | 205 | C3H Transcription Factor Family | AT3G14970 | 44.156 | 7.85e-13 | 63.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g04673 | - | K22378 | ccaj:109804929 | 105.145 |