Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04662 ATGGTAAAACAGAATGGCAATCGCCCCGCATGCGCTGCTTGCAGGCATCAGAGGAAAAAGTGTAACGATAAGTGTGTTCTTGCTCCTTTTTTTCCATCAAACAAGACCCAACAGTATGAAGCTGTTCACAAAGTCTTTGGTTTCAGCAACATTGCAAAGATGCTCACAAACCTTAGTGAATATGAAAGAAAAGAAGCCATTGAGTCTTTTGAATGGGAAGCCATGATGTGGAAGCAAGACCCTATCTTTGGACCCCTTGGTGCCTTCAAGAAAGTCCGTGACATGATCACACAACTATTGAACCAACAACAACAACAGTTGATTGCCCTGACCCAAGGTTCATCACCCTTTAACAATATCACCACCAATGAGGCTCTTGGAGTTTCTAACAATCTCAATTGGGCTCCTCAGGTGTCTAACAATGTTGTGCAAACTCCCAAGTCTTCTTACCAAGAAAAAGATTTAGTGTCATACCCATATGTGTTTAATAACTTTAGGAATGTTCTGCAGAATGAGGCAGGGGACCCAGAAATATTGGCATATGATCCTGTCCTTAATGCACTAGCTTCACTCCAACAAAGGAGTTTGCAGTCTGATAATGATCATTTTCCAAGGCCTGGTACAGTATTGTCTTCAGCTATGGATCAATCAAGCCAAATTAGAGACTTTCAATATTATAATGAAAATAAGATCAACGGAGAAGTAGTAATGCAAGGTGGAGGTCAAGGAAGTGATGACAATGTTGAAAATATTTACTCTGATGGACATGTACAAGGGAGAGGAGTTAGCCAAAATGGTGGAGTAGGGCAGACACAACAGGACCATGAAGTGGTAACAACTGTTGAGAATAATGTCACTGAAGGTAACGTTGATCATACACTGTTGAGGAGCCAAATAACAGAATCACAGAATCCTTCTTATTATCCTCTTGATCCTCTTGATAATACTGCCAGAATTAAGCAAGAATACCAACATTGCTTAAAACAGCATAAGGTTCATCCCCTGCCTCTCTCATTGAAAATGAAAAAGATAATGTGTTGA 1041 0.4035 MVKQNGNRPACAACRHQRKKCNDKCVLAPFFPSNKTQQYEAVHKVFGFSNIAKMLTNLSEYERKEAIESFEWEAMMWKQDPIFGPLGAFKKVRDMITQLLNQQQQQLIALTQGSSPFNNITTNEALGVSNNLNWAPQVSNNVVQTPKSSYQEKDLVSYPYVFNNFRNVLQNEAGDPEILAYDPVLNALASLQQRSLQSDNDHFPRPGTVLSSAMDQSSQIRDFQYYNENKINGEVVMQGGGQGSDDNVENIYSDGHVQGRGVSQNGGVGQTQQDHEVVTTVENNVTEGNVDHTLLRSQITESQNPSYYPLDPLDNTARIKQEYQHCLKQHKVHPLPLSLKMKKIMC. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04662 346 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Seca12g04662 346 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 153 - -
Seca12g04662 346 Pfam Lateral organ boundaries (LOB) domain 10 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04662 Seca-Chr12 126677222 126678262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04662 10 92 AS2 family AT1G06280 46.988 5.11e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca12g04662 LOB 5.2e-30 No_clan