Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04651 ATGATTCAGCAAAGTTTTGTTTATTATAGGGAAGGTGGGAAACATCCGAGGAGTAGAAGTTTGAGGAGGAAGCCGAGAAAGAGTATTAGGTGTGGTTGCCTAGCCAGTTGCCAAGTGCACATAATGTATGGGACTAATCGGTGGTACTTTAAAAAAATAATTGATGAACATAACCACTTGTTGTTGGAGGAAAAGTATATTGGGTTATTACCTACTCATAGAAAGATGAGTGATGAAGATGTGGTTCAAATGATGAACATGAGGAAGGTGGGGATTAAAACTCCACACATATATGGGTCCTTTGCTAGCCAAATGGGAGAGTATGCAAATGTTCGCTTCCGCAAAAAAGACATGTACAATGTTATTGACAAGCAAAGGCGGGAGAAAGGGTTAGATGCGAGAGCTGCATTGGCATATTTACAGTGTTTGAGAAGTAATGATGAAGCTATGTATTGGAGGCACACAATTGATGAGGAGGGCAGACTTGAGCACCTTTTTTGGTGTGATGGGCGTTCACAAACAAATTATGGTGTGTTTGGAGATGTGTTGGCATTTGATGCGACCTACAAGAAAAACAGGTATTGTTGTCCAATGGTGGTTTTTTCTGGGGTTAATCATCATAATCAAAGTATTGTATTTGGGTGTGCTTTGGTTTCCAATGAGATAGAGGATACGTATGTGTGGGTCCTAGAACAATTTCTAGATGCAATGAAGGGCAAGGCCCCCGTGTCAGTAATAGCTGATGGTGATGTAGCAATGAGGAATGCCATTAGAAGAGTATTACCTAGTGCACACCATAGGTTATGTGCTTGA 813 0.4096 MIQQSFVYYREGGKHPRSRSLRRKPRKSIRCGCLASCQVHIMYGTNRWYFKKIIDEHNHLLLEEKYIGLLPTHRKMSDEDVVQMMNMRKVGIKTPHIYGSFASQMGEYANVRFRKKDMYNVIDKQRREKGLDARAALAYLQCLRSNDEAMYWRHTIDEEGRLEHLFWCDGRSQTNYGVFGDVLAFDATYKKNRYCCPMVVFSGVNHHNQSIVFGCALVSNEIEDTYVWVLEQFLDAMKGKAPVSVIADGDVAMRNAIRRVLPSAHHRLCA. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04651 270 Pfam FAR1 DNA-binding domain 2 62 IPR004330 -
Seca12g04651 270 Pfam MULE transposase domain 182 269 IPR018289 -
Seca12g04651 270 PANTHER OS01G0519700 PROTEIN 19 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04651 Seca-Chr12 126521362 126522174 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g04651 MULE 3.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04651 - - tpra:123905832 344.739