Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04644 ATGGGTTCAGGAGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAAGGAGGCAGATCAAAAAAAGCAAAGGGATCTTTAGCTACAGAGAAATTAAGTGCATTGAAGACTGAGAATTATACAGGAAAAGAGTCCAGTGGTTTAGCAAATGGCATTAAAAGTGAAAATCTTGTGTCAGATGAGGTATTAGTTGAAACTATTGCTGCTACAAGGATACAAACAGCATTCCGGGCCTATAAGGCTAGAAAATCTTTACATCGCTTGAAAGGATTCACAAAACTGAAGAACCTGACTGAAGGTTACTCTGTTAAAAAACAAGCTAGTACAGCTATTACTTATCTTCATACATGGAGCAAAATACAGGCTGAGATTAGAGGTCGTCGAATATGTATGGTGATGGAAGACAAGATCAAGCAGAAGAAACTACATTCTCAACTAAAACTTGAGGCAAAGCTCCATGACCTAGAGCAGGTGGAATGGTGTGGTGGTTCTGAGACCATGGAGGAAATCCTTGCAAGATTACATCATAGAGAAGAAGCAGCTGTCAAGAGGGAAAGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGGCCAACTCTAGTCAAAGCCAAGGGCTAGGTAATTATGAACTCAACAAAACTGGTTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCACGTCCATGGGAAAGTCGAGTCCCTAGTATAACCATTAGCCCCAAGAAAGCTCAAAATATGCAGTCAGGCAAAGTTCAGAAGGATAAGAACCCATCAACACCAAAAGAATCAGCTTCAGTTAAACCTGCTTCAGCTAATGCAAAAGGGACTACAAAAGCTAGGAGATTGTCTTACCCGGCCACAGAGAAAACAGTGGAGCATGAAGGAAAGGAAAGCAATGAGCACTCTTGTTGA 918 0.4161 MGSGDWFKTIISLRKSKGGRSKKAKGSLATEKLSALKTENYTGKESSGLANGIKSENLVSDEVLVETIAATRIQTAFRAYKARKSLHRLKGFTKLKNLTEGYSVKKQASTAITYLHTWSKIQAEIRGRRICMVMEDKIKQKKLHSQLKLEAKLHDLEQVEWCGGSETMEEILARLHHREEAAVKRERAMAYAFSHQWRANSSQSQGLGNYELNKTGWGWSWKERWIAARPWESRVPSITISPKKAQNMQSGKVQKDKNPSTPKESASVKPASANAKGTTKARRLSYPATEKTVEHEGKESNEHSC. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04644 305 MobiDBLite consensus disorder prediction 287 305 - -
Seca12g04644 305 Pfam IQ calmodulin-binding motif 69 86 IPR000048 GO:0005515
Seca12g04644 305 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Seca12g04644 305 MobiDBLite consensus disorder prediction 239 274 - -
Seca12g04644 305 MobiDBLite consensus disorder prediction 237 305 - -
Seca12g04644 305 PANTHER IQ-DOMAIN 5-RELATED 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04644 Seca-Chr12 126373547 126378597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04644 1 287 IQD Protein Family AT2G33990 51.890 1.39e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04644 - - gmx:100786185 460.685