Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04619 ATGTCATCTTTAGATGTTGATTGCAAGCCAAGAGTCGGTATGGAATTTGATAGTGTAGAGACAACTTGGCAATTTTGGCTTAGATATGGGGCACAAACTGGCTTTGGAGTTCGATTACGATACACAAACAAAAGAAAGCAAGATGGTGCTATTACTTCATGTAGATTTGTTTGTTGCAAGGAGGGGGTGCGAACAACAAACAGTGCTTTAGTTAGCAACCATAGAGCTGCGACTAGAACTGGTTGCAAAGCAAGGATGTCACTTATATTGAAGAATGATGAAAAGCTTGTCCCACATGAGTTTGTAGAGGACCATAACCACCCTCTACAACTTCCAGAGACAACACACATGCTTGCATCACACATAAAAATAAGAGAAGTCCAAACATATGAGATTGATCTAGCGGATGACTCTGGATTAAAGCAAAAGTCAGCATTTCAGCATATGAGCACACATGCAGGGCATAGATCTAATCTTGGATATACACGTTTGGATTTAAAAAATTACCTCAATGCAAGAAGACAAAGAAGCATAGTGTATGGTGAAGTTGGATGTCTTTTGCAATATTTTCAACGACAATTAAAGGAAAACCCATCTTTCTTCCATGCATTCCAAATGGATATGAATGAACAAATCACAAATGTATTCTGGGTTGATGCAAATATGGTGTTGGATTATGGGTATTTCAGTGATGTTATGTCATTGGATACTACATAG 717 0.3821 MSSLDVDCKPRVGMEFDSVETTWQFWLRYGAQTGFGVRLRYTNKRKQDGAITSCRFVCCKEGVRTTNSALVSNHRAATRTGCKARMSLILKNDEKLVPHEFVEDHNHPLQLPETTHMLASHIKIREVQTYEIDLADDSGLKQKSAFQHMSTHAGHRSNLGYTRLDLKNYLNARRQRSIVYGEVGCLLQYFQRQLKENPSFFHAFQMDMNEQITNVFWVDANMVLDYGYFSDVMSLDTT. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04619 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 167 - -
Seca12g04619 238 Pfam FAR1 DNA-binding domain 24 110 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04619 Seca-Chr12 125800363 125801079 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g04619 FAR1 1.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04619 - - cam:101507947 354.369