Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04608 ATGGCTCCAACCAAAGATGAAGAATTTAAGCTGAAGGAGTTTCAAGATGTATCACCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAAAGTTGTGCTTGATATACCTTTCGCATTCAAGAGAGTGGATGCTATGCTGTACATTGCTAATTTTGATTCAGAATTGGAATACCTGAAGAAGTCTTTTGAAACTCTGGAGATGCATGTACCTGCAGTTCTCATATTTTATCCTTTTCTACAGGTGGCATGTGAGGAATTAAGAAATAGCAGAATGTTTTTTAAGATACTTGAAGCAGTGCTCAGAACAGGAAATCGTATGAATGTAGGCACCAATCGCGGCGATGCACAAGCATTCAAGCTGGACACACTTTTGAAGTTAGTTGACATCAAAGGAACTGATGGAAAGACCACTCTCTTGCATTTTGTTGTACAGGAAATTGTCAGAACTGAGGGTTCTCATATTTCCGGTGCTAATGATCACCAGGATTCTGACAACATCCAGCAATATACTCTTCAAGATGAAGTAGACTTTAGGAAGCTTGGACTTCAAGTTGTTTCTGGCTTGAGTGGAGAGCTCACCAATGTTAAAAAGGCAGCTGCTATGGATTCAGACATGCTGAGTAGTGATGTTAGTAAACTTGCAAGAGGAATTGAAAAGGTTGTGCAAGTTGTAAAATTGAATGAAGAATCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGTCAATGAAAGGTTTCTTGGAGAAGGGGGAGGAAGAGATTTTAAGAATCCAGGCTCAAGAGAAAAATGCTTTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGATTGTGAGGGATTTCCTTTCAATACTAGATGGTGTATGCAAGGAAGTTGGGAAAGCAAATGAGAGGACTTTAGTTGGTTCTCGTCAATATGTAATGCCTGCAAATCCTACATTGCCAGCAATTTTCCCTGAGATTATTCCTAAGCAGCCATCTGATTCTTCAGAATCTGATTAA 1047 0.3878 MAPTKDEEFKLKEFQDVSPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEMHVPAVLIFYPFLQVACEELRNSRMFFKILEAVLRTGNRMNVGTNRGDAQAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGANDHQDSDNIQQYTLQDEVDFRKLGLQVVSGLSGELTNVKKAAAMDSDMLSSDVSKLARGIEKVVQVVKLNEESPLKETNQKFSESMKGFLEKGEEEILRIQAQEKNAFSSVKEITEYFHGNSAKEEAHPFRIFMIVRDFLSILDGVCKEVGKANERTLVGSRQYVMPANPTLPAIFPEIIPKQPSDSSESD. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04608 348 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 313 - -
Seca12g04608 348 Pfam Formin Homology 2 Domain 1 300 IPR015425 -
Seca12g04608 348 Gene3D Formin, FH2 domain 1 322 IPR042201 -
Seca12g04608 348 PANTHER FORMIN-RELATED 1 339 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca12g04608 348 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 326 IPR015425 -
Seca12g04608 348 SMART it6_source 1 315 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04608 Seca-Chr12 125662560 125664670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04608 1 337 FH2 protein (formin) Gene Family AT3G25500 64.497 5.19e-145 434