Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04576 ATGGCATCAGATGGCCACTCACCACCTCTGGAGATATTAGTTCGAGGGCCAGAAGAATTCTCACTCTGGACTGGACCCCCATTTGCCAATGGTCAACCTGGTGTCAAGCTTGAAAAAGTTAATTGCGTGAATGCAAAATTCAGTGATGATGGATCTAGACTTATGGTGATGAAATCCAACTCTGTGATTAGTGTATATGATTGCAAAAGTGCTAAAGAGATTAGGTCTTTTGAAGTGCCCAATGTTGTAGCGGCTATCCTGTCACCCTGTGGAACATATTTGCAAACCTTCAAAAAACCTGCGCCGCAAGAAAAGAATGTGACTCTGTGGAAAACAGAGACCGGTGATCCTGTTTACCAGCACTCCCAAAAGAACCTGACAAAAACCAATTGGCCTGCAATTCAATTCAGTTCTGATGAAGCTACTGCATGCCGGATGGCAACTAATGAGGTGCAATTTTTTGACACTGGGGATTTCTCTAAAGGAGTTATCCATCGGTTAAAAGTTCCAGGAGTTGCTGCCATTGAGCTTTCTAGCACGCCTGGGTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGGGTTCCTGCTAGTGTACAAATATATGCTTGTGGAAATGCTTCCCAAAGTCAACCAGTTGCTCGACGGAGTTTTTTCCGATGTTCCACGACCCAACTTAAATGGAATAATGGTTCAACTGGGCTTCTAGTGGTAGTGCAGTCAGACGTTGACAAAACCAATCAGAGTTACTATGGAGAATCAAAGTTATGCTACCTGACAACAGATGGGATGCATGAAGGACTTGTGCCTCTTCGGAAAGATGGACCTATTCATGATGCTCAGTGGTCATATTCTGGCTTGGAATTTGCTGTTGTATATGGGTTTATGCCTGCTAAAGCAACTGTGTTTGACAAGAAGTGCAATCCTCTACTGGAACTTGGAACTGGTCCTTACAACACTCTTCGATGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGATTTGGTAACTTGCCTGGTGATATGGCATTCTGGGATTACGCAGAGAAGAAGCAGCTTGGAACAACTAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGTAA 1164 0.4416 MASDGHSPPLEILVRGPEEFSLWTGPPFANGQPGVKLEKVNCVNAKFSDDGSRLMVMKSNSVISVYDCKSAKEIRSFEVPNVVAAILSPCGTYLQTFKKPAPQEKNVTLWKTETGDPVYQHSQKNLTKTNWPAIQFSSDEATACRMATNEVQFFDTGDFSKGVIHRLKVPGVAAIELSSTPGSHVAAFVPESKGVPASVQIYACGNASQSQPVARRSFFRCSTTQLKWNNGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAKATVFDKKCNPLLELGTGPYNTLRWNPKGKFLCLAGFGNLPGDMAFWDYAEKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNG. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04576 387 Gene3D - 28 198 IPR015943 GO:0005515
Seca12g04576 387 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 387 IPR011387 GO:0003743|GO:0006413
Seca12g04576 387 Pfam Eukaryotic translation initiation factor eIF2A 216 387 IPR013979 -
Seca12g04576 387 FunFam Eukaryotic translation initiation factor 2A 30 184 - -
Seca12g04576 387 Gene3D - 199 379 IPR015943 GO:0005515
Seca12g04576 387 SUPERFAMILY DPP6 N-terminal domain-like 42 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04576 Seca-Chr12 124906894 124909521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04576 130 387 Eukaryotic Initiation Factors Gene Family AT5G27640 25.735 2.05e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04576 K15026 - gmx:100811589 729.939