LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g04553	ATGGAATCAAACTTGACTCTCAAAGCTGGTCTTGAATTCGATAATTTAGAAGACACATGGCAATTTTGGGTGAGTTACGGAGGCATAAAAGGCTTTGGAGTTAGAAAACAATATTTAAGCAAGAGTAAGAAAGATGGTTTCGTTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGGAAACCAAACTCAAAGGATTATAAAATGACCAATCCAAAACCCGAGATAAGAACAGAATGTATGGCAAGAATTAAAGTCAAACGATTCAATGAAAAATACAGAGTGATCACTTTTATTGATGATCACAATCACCCACTGCAACCACCAGAAACAGTGCATATGTTAGCTTCTCAACGAAGAATAACTGAACATCAAGCATATGAACTTGAAGTGGCAGAAGGCGTAGGGATTCAACAGAAAGCCTCGTTTAAGTTGATGAGTAAATATGTAGGAGGTAGAGAGAATCTAGGGTATACTAAACAAGATGCAAAGAATTATTTGAATTCTAGGAGGCAGCGAGATATGGCTTATGGTGAAGCTGGGTATTTGCTACAATATTTCCAACAACAATTGATAGATAATCCTTCATTCTTCCATGCATACCAAATGTATTTGGAAGAGCAAATAACAAATGTATTTTGGGCTGATACAAAAATGTTGTTTGACTATCATTGCTTTGGTGATGTCATTTCTTTGGATACCACATATTGTACAAATGGAGATCATCGACCCCTTGCAATTTTCTCGGGCTTCAACCATTATAGAGGAGGGGTGATCTTTGGGGCAACTTTACTATATGATGAAACTACTTACTCGTTCAAATGGCTTTTGGAAACTTTCTTGCAGGCACACAACAACAAAAAAAACAACAAACTGTTTTTACTAACCAAGACCAAGCCATGGCAAGAGCACTGCGAGAGGTTATACTAG	933	0.3719	MESNLTLKAGLEFDNLEDTWQFWVSYGGIKGFGVRKQYLSKSKKDGFVTSYLYVCCKEGVRKPNSKDYKMTNPKPEIRTECMARIKVKRFNEKYRVITFIDDHNHPLQPPETVHMLASQRRITEHQAYELEVAEGVGIQQKASFKLMSKYVGGRENLGYTKQDAKNYLNSRRQRDMAYGEAGYLLQYFQQQLIDNPSFFHAYQMYLEEQITNVFWADTKMLFDYHCFGDVISLDTTYCTNGDHRPLAIFSGFNHYRGGVIFGATLLYDETTYSFKWLLETFLQAHNNKKNNKLFLLTKTKPWQEHCERLY.	311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g04553	310	Pfam	FAR1 DNA-binding domain	21	109	IPR004330	-
	Seca12g04553	310	PANTHER	OS01G0519700 PROTEIN	6	290	-	-
	Seca12g04553	310	Pfam	MULE transposase domain	230	296	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g04553	Seca-Chr12	124400451	124401383	Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca12g04553		FAR1	1.3e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g04553	-		-	gmx:100795482	468.003