Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04544 ATGGAAGCTATGTTGTTCCTGGAAGAGGATACAAGGAGTCCAGGCTTGATGGCTTCTCTGTCTGGCTCAGGAACCATGTCACTGCCTGTATTCGGAAACCAGGGTGAAATGACTCCTTGTCGCTGGACCGTCTTCCCTTCTCGCCACTGGAAGGTCATTGCTGGTGGTTGCGTTCGTTGCTGCTTCGTTCCGATTGCGCTCGATGGAAACTGTCGCGTCGTTCTCCATGTGAAGCTCGTCTCTGGTGGTCAATTGTGGTCGTTGTTGCTCCGTTCGCTGTTGAAGCTTGTTGCTAGTGGTGGCTGCTGCTTCGTTCGTTGCTTCTCCGTTCCGACGGAGAGCTTCGCAGCAAGCTTTAGGGATATCAAAGGGGTTAACATACTAGTTGACCCTAATGGTGAAATCAAACTAGCAGACTTTGGAGTGGCTAAACATGCAAGTTTATTTGATTATGTAAACTCTAAGATGTGGCTTTCCACTTTTCCTTTCAATGTCTATTGTTAA 504 0.4821 MEAMLFLEEDTRSPGLMASLSGSGTMSLPVFGNQGEMTPCRWTVFPSRHWKVIAGGCVRCCFVPIALDGNCRVVLHVKLVSGGQLWSLLLRSLLKLVASGGCCFVRCFSVPTESFAASFRDIKGVNILVDPNGEIKLADFGVAKHASLFDYVNSKMWLSTFPFNVYC. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04544 167 Gene3D Transferase(Phosphotransferase) domain 1 118 165 - -
Seca12g04544 167 SUPERFAMILY Protein kinase-like (PK-like) 118 152 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04544 Seca-Chr12 124034983 124035918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04544 120 159 MAP Kinase Kinase Kinase AT1G53570 61.364 2.80e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca12g04544 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04544 K04421 - gmx:100780004 58.151