Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04535 ATGGATTTCTTCTTTTTCTTCTGCTTGCTTGCTACCTTGGCTCCTCTTGTTCATATGTTTCCCTTTACTAATAATAATAATAACGAGCTTGATGTTAATTTCTATGACGGATCATGCCCCGGGTTGCCGATGATTGTTAGATATGGTGTTTGGTCAGCCATCAGAAATGACACCAGAATGACTGCATCCCTCCTTCGCTTGCACTTTCATGATTGCATAGTAAATGGCTGTGATGGTTCGGTGCTTCTTGATGATACGCCAGATTTCACAGGTGAAAAGAATGCCCTTCCTAATCGCAATTCAATTAGAGGGTTTGAAGTGATTGATAACATAAAAGAAGCAGTTGAGAGGGCATGCCCATCCACAGTTTCCTGTGCTGATATATTAGCCTTTGCAGCTAGGGAAGCTGTTTCTCTGTCAGGAGGGCCTTTTTGGGCGGTTGCATTAGGGAGACGTGATGCAATAACAACCAGTCAAACAGCAGCTAATCAACAGATTCCTTCACCTTTTGAGCCTTTAGAAAACATCACTGCAAAGTTCGCTTCAAAGGGTCTTGACTTGAACGATCTTGTAGTCCTATCAGGAGGACATACTATTGGTTTTGCTCAATGCTTCACCTTCAAAACCAGACTTTTTGACTTTCAAGGCTCTGGCAAACCTGATCCTGTGCTTGACTCTTCAATGCTCTCAAAATTACAAACCATGTGTCCAAATAAAGACACTTCAAACAGCAATATAGCTCCTCTTGATGCAACAAGCACTTTCAAGTTTGACAATGCTTATTACACAAATCTTGTAAGCAACTCAGGGCTTCTTGATTCTGATCAAGCACTGATTGGGGATCTAAGGACTGCTGCTATGGTTAATTATTACAGCACCAACCAATTTTCCTTCTATAATGATTTTGCTGCATCCATGGTCAAGCTTAGTAATGTTGGGGTACTTACAGGTGAAAATGGCCAAATTAGAAAGAAATGTGGCTCTGTGAACTAA 993 0.4119 MDFFFFFCLLATLAPLVHMFPFTNNNNNELDVNFYDGSCPGLPMIVRYGVWSAIRNDTRMTASLLRLHFHDCIVNGCDGSVLLDDTPDFTGEKNALPNRNSIRGFEVIDNIKEAVERACPSTVSCADILAFAAREAVSLSGGPFWAVALGRRDAITTSQTAANQQIPSPFEPLENITAKFASKGLDLNDLVVLSGGHTIGFAQCFTFKTRLFDFQGSGKPDPVLDSSMLSKLQTMCPNKDTSNSNIAPLDATSTFKFDNAYYTNLVSNSGLLDSDQALIGDLRTAAMVNYYSTNQFSFYNDFAASMVKLSNVGVLTGENGQIRKKCGSVN. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04535 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Seca12g04535 330 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Seca12g04535 330 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 Gene3D - 33 330 - -
Seca12g04535 330 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Seca12g04535 330 PANTHER PEROXIDASE 72-RELATED 28 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 FunFam Peroxidase 167 309 - -
Seca12g04535 330 Gene3D Peroxidase, domain 2 167 309 - -
Seca12g04535 330 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g04535 330 FunFam Peroxidase 33 178 - -
Seca12g04535 330 SUPERFAMILY Heme-dependent peroxidases 30 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04535 Seca-Chr12 123899649 123903829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04535 1 327 Peroxidase AT1G49570 59.767 1.20e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04535 K00430 - gmx:100812961 502.286