Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04518 ATGGATTCAGGCTCTAGCGAAGTAGCTCATGATTTCTTACCCCTTCTCAAAATCAGAATCTACAAAGACGGTCGCGTAGAGAGACTCAAAGGGTGTGATTCTGTTCCCCCTTCGCATGATCCCACAACCAACGTCGATTCCAAAGACGTTGTGATCTCAAAAGACGAAGACATATCAGCCAGGATCTTCGTTCCTAAACTCAACAACAATCCAAACCAAAAGCTCCCCCTCCTTGTCTACTTCCACGGTGGTGGTTTCTGCATAAATACACCTTTCTTCCCTCCTTACCACAAATTCCTAAACTCAATTGTTTCTCAAGCTCATGTAATCGGTGTCTCTGTTCATTACAGAAGAGCACCAGAACACCCTCTTCCCATTGCTTATGAAGATTCATGGACTTCCCTCAAATGGGTCGCTTCCCATTTCGGTGGAAACGGTCCTGATGAGTGGCTCAATCGCCACGCAGATTTTGAGAAGGTGATTTTCGCAGGGGACAGTGCAGGGGCTAACATTGCACACCACATGGGTCTTCGGGTTGGAATGGAAGGGCTTTCGGGTGTGAAGCTTGAAGGGATTGTTTTGGTGCATTCCTACTTTTGGGGCAGTGAAAGAATTGGATCTGAGACCAAAAAACCTGAACATTCCTTGGTGGATGATTTATGGCACATCACATGCCCAACCACAACTGGATCCGATGACCCGTTTATCAACCCGGCTAAGGATCCGAATTTGGGGAAGCTTGGTTGTAAAAGAGTTTTAGTTTTTGTTGCTGAGAATGATTTGTTTAGGGACAGGGGTTGGTATTATAAGGAATCTCTGGAGAAGAGTGGGTGGCATGGCGTTGTGGAAGTGATGGAGGCAAAAGGTGAAGGACATGTGTTTCATCTACTCAATCCAAACTCTGAGAACGCTCTTTCCTTGCTCAATCGAATTGCTTCCTTCATCAACCATAATTAA 957 0.4556 MDSGSSEVAHDFLPLLKIRIYKDGRVERLKGCDSVPPSHDPTTNVDSKDVVISKDEDISARIFVPKLNNNPNQKLPLLVYFHGGGFCINTPFFPPYHKFLNSIVSQAHVIGVSVHYRRAPEHPLPIAYEDSWTSLKWVASHFGGNGPDEWLNRHADFEKVIFAGDSAGANIAHHMGLRVGMEGLSGVKLEGIVLVHSYFWGSERIGSETKKPEHSLVDDLWHITCPTTTGSDDPFINPAKDPNLGKLGCKRVLVFVAENDLFRDRGWYYKESLEKSGWHGVVEVMEAKGEGHVFHLLNPNSENALSLLNRIASFINHN. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04518 318 Pfam alpha/beta hydrolase fold 78 295 IPR013094 GO:0016787
Seca12g04518 318 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 160 172 IPR033140 -
Seca12g04518 318 SUPERFAMILY alpha/beta-Hydrolases 20 317 IPR029058 -
Seca12g04518 318 PANTHER ARYLACETAMIDE DEACETYLASE 16 302 - -
Seca12g04518 318 Gene3D alpha/beta hydrolase 13 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04518 Seca-Chr12 123214706 123215662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04518 6 316 Carbohydrate Esterase AT3G48700 50.307 4.40e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04518 - - gmx:100801816 489.189