Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04517 ATGGATTCAAGCTCTAGCGAAATAGCCCATGATTTCTCACCCCTTATCAAAATATACAAAGACGGTCGCATAGAGAGACTCCTAGGGTGCGATTTTGTTCCCCCATCTCTTGATCCTACAACCAACGTCGAATCCAAAGATGTTATGATCTCAAAAGATGAAGACATATCAGCCAGGATCTTCATTCCTAAACTCAATGATGATCAAAACCAAAAGCTCCCCGTCTTTGTTTACTTCCACGGTGGTGGTTTCTGCATAGAAACACCTTCTTCACCTCATTACCACAAATACGTCAACTCAATTGTTTCTCAGTCGCATGTAATTGGTGTCTCTGTTCATTACAGAAGAGCACCAGAACACCCTCTTCCCATTGCTTATGAAGATTCATGGACTTCCCTCAAATGGGTCGCTTCCCATTTCGGTGGAAACGGTCCTGATGAGTGGCTCAATCGCCACGCAGATTTTGAAAAGGTGTTCTTTGCAGGGGACAGTGCAGGGGCTAACATTGCACACCAGATGGGTCTTCGGGTTGGAATGGAAGGGCTTTCGGGTTTGAAGCTTGAAGGGATTGTTTTGGTGCATTCCTACTTTTGGGGCAGTGAAAGAATTGGATCAGAGACCAAGCGATCTGAATATTTAGCCATGGTGGAGAATTTATGGCGTTTTATTTGCCCAACCACAACTGGATCCGATGACCCGTTGATCAACCCGGCTAAGGATCCGAATTTAGGGAAGCTTGGTTGTAACAGAGTTTTAGTTTTAGTTGCTGAGAATGATTTGTTTAAGGACAGGGGTTGGTATTATAAGGAAGTTCTGGAGAAGAGTGGGTGGCATGGTGTTGTGGAGGTGATGGAGGCAAAAGGTGAAGGACATGTGTTTCATCTGTTCAATCCAAACTGTGAGAATGCTCTTTCCTTGCTCAATCGAATTGCTTCCTTCATCAATCACGGTTAA 954 0.4434 MDSSSSEIAHDFSPLIKIYKDGRIERLLGCDFVPPSLDPTTNVESKDVMISKDEDISARIFIPKLNDDQNQKLPVFVYFHGGGFCIETPSSPHYHKYVNSIVSQSHVIGVSVHYRRAPEHPLPIAYEDSWTSLKWVASHFGGNGPDEWLNRHADFEKVFFAGDSAGANIAHQMGLRVGMEGLSGLKLEGIVLVHSYFWGSERIGSETKRSEYLAMVENLWRFICPTTTGSDDPLINPAKDPNLGKLGCNRVLVLVAENDLFKDRGWYYKEVLEKSGWHGVVEVMEAKGEGHVFHLFNPNCENALSLLNRIASFINHG. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04517 317 Gene3D alpha/beta hydrolase 19 316 IPR029058 -
Seca12g04517 317 PANTHER ARYLACETAMIDE DEACETYLASE 12 301 - -
Seca12g04517 317 SUPERFAMILY alpha/beta-Hydrolases 5 315 IPR029058 -
Seca12g04517 317 Pfam alpha/beta hydrolase fold 76 294 IPR013094 GO:0016787
Seca12g04517 317 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04517 Seca-Chr12 123151241 123152194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04517 6 315 Carbohydrate Esterase AT3G48700 50.309 1.16e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04517 - - gmx:100801816 516.924