Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04516 ATGATAAGGTACGCAGGAGCCACTGGACACCAATACCTGAAATATCTCCATGTCCCAACAAAAGCAAACTTCCCACTAGTGAATCTGATTAGCCATTCCTTCCCTCTCCAACTTCCCCTTATAGCATATAAGCCTCATTTACTTCCCTCTCTGAAACTAAAAAAACCTTTACACTGTACACCACCCTCATCAACCATGGACGCAACCTCTACCGACAGTGAAATAGCCTTTGATATCTCTCCCATCATGAAAGTCTACAAAAACGGTCGTGTGGAGAGGCTAGCTGGTGAAGAAGTTGTTCCTCCTTCCCTTGATCCCAAAACCAACGTTGAATCTAAAGACGTCGTAATCTCCAAAGAAGATGGCATATCCGCGAGGCTTTTCATTCCCAAAACCAATTATCCTCCATCCCAAAAGCTCCCTCTTTTTGTTTACTTCCACGGTGGTGCATTCTGCATCGAAACCCCATTCTCCCCAAACTACCACAACTTCGTTAACACTGTTGTCTCAATGACTAACACGATTGGTGTCTCTGTTCACTACAGGAGAGCCCCAGAGCACCCTGTTCCAATCGCCCATGAAGATTCATGGCGTGCCCTGAAATGGGTCGCTTCCCATGCTGGTGGAAATGGCCCTGACGAGTGGCTGAATCTCCATGCTGATTTTGGGAAGGTGTTCTTCTCAGGGGACAGTGCTGGTGCCAACATTTCACACTATTTGGGTATTCGGGTTGGCACAGAAGGGTTGCCTGGTGTGAAGCTTGAAGGGATTGCGTTGGTGCATCCTTATTTCTGGGGAGTGGATCGAATTGGGTCTGAGGGGGAAAGGGCTGAACATTCGTCGAAGGTGAATGATTTATGGCGTTTTTCATGTCCAACCACGACTGGATCCGATGACCCGCTAATCAACCCGGCTAAGGATCCGAATCTGGGGCGGTTAGGTTGTAGCAGAGTGCTTGTTTGTGTTGCTGGGAACGATTTGTTGAAGGACAGAGGTTGGAATTACAAAGAGTTGCTTGAGAAGAGTGGGTGGTCTGGACCAGTGCAAGTGATGGAAGCAAAGGATGAGGAACATGTGTTTCATATGTTCAAACCAACCTGTGATAATGCTCTGGCTTTGCTGGACCAAATTGCTTCCTTTATCAAACATAATTGA 1155 0.4701 MIRYAGATGHQYLKYLHVPTKANFPLVNLISHSFPLQLPLIAYKPHLLPSLKLKKPLHCTPPSSTMDATSTDSEIAFDISPIMKVYKNGRVERLAGEEVVPPSLDPKTNVESKDVVISKEDGISARLFIPKTNYPPSQKLPLFVYFHGGAFCIETPFSPNYHNFVNTVVSMTNTIGVSVHYRRAPEHPVPIAHEDSWRALKWVASHAGGNGPDEWLNLHADFGKVFFSGDSAGANISHYLGIRVGTEGLPGVKLEGIALVHPYFWGVDRIGSEGERAEHSSKVNDLWRFSCPTTTGSDDPLINPAKDPNLGRLGCSRVLVCVAGNDLLKDRGWNYKELLEKSGWSGPVQVMEAKDEEHVFHMFKPTCDNALALLDQIASFIKHN. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04516 384 Gene3D alpha/beta hydrolase 70 384 IPR029058 -
Seca12g04516 384 Pfam alpha/beta hydrolase fold 143 362 IPR013094 GO:0016787
Seca12g04516 384 PANTHER ARYLACETAMIDE DEACETYLASE 79 367 - -
Seca12g04516 384 SUPERFAMILY alpha/beta-Hydrolases 68 383 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04516 Seca-Chr12 123136048 123137202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04516 72 382 Carbohydrate Esterase AT3G48690 50.000 7.56e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04516 - - gmx:100815625 553.132