Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04491 ATGCTAACTAGTCCTGAGGCTGCAAGGTTTGTGTTGGTGACTCATGCTCACTTGTTCAAACCCACATACCCAAAAAGCAAAGAGAAACTCATAGGCCCTGCTGCATTGTTCTTTCACCAAGGAGATTACCACACTCGCATTAGAAAGCTTGTTCAAAACTCCCTTTCTCCTGAATCAATCCGGAAACTCATCCCTGACATCGAAACTGAGGTCATTTCTGCCTTGGAATCATGGGTTTCTAATGGACAAGTCATTAACGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTCACTTGGAAGGGAAATATAGAGAGAAGCTTAAGCAAAATTATTGCATAGTAGAGAGAGGCTACAATTCTTTCCCAACAAGGATACCTGGAACTGCATACTCTAAAGCACTTTTGGCAAGGAAGAGAATCAGAGAGATTATAAGTGAGATAATTTGTAAGAGAAAGGAGCAGAGATTGATTGAGAAGGATCTCTTAGGCCACTTGCTGAACTACAAGGATGAAAAGGGACAAACACTAACGGATGACCAAATTGCTGATAATGTAATTGGAGTACTTTTTGCAGCACAGGATACTACAGCAAGTGTTCTAACATGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTATATGAAGCAAATGAAGAAGGGAAGATGCCCTTGACATGGGGTCAGACTAGAAATATGCCAATTACTTATAGGGTAATATTGGAAAGCCTTAGGATGGCAAGCATCATATCATTTACTTTTAGGGAAGCTGTTGTTGATGTAGAATACAAAGGATATCTTATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGGAATATCCATCATAATCCAGAATTCTACCCTGCTCCTCACAATTTTGACCCATCAAGATTTGAGGTACACTATGCTTAA 969 0.3973 MLTSPEAARFVLVTHAHLFKPTYPKSKEKLIGPAALFFHQGDYHTRIRKLVQNSLSPESIRKLIPDIETEVISALESWVSNGQVINAFQEMKKFSFNIGILSVFGHLEGKYREKLKQNYCIVERGYNSFPTRIPGTAYSKALLARKRIREIISEIICKRKEQRLIEKDLLGHLLNYKDEKGQTLTDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEANEEGKMPLTWGQTRNMPITYRVILESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEVHYA. 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04491 322 SUPERFAMILY Cytochrome P450 2 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04491 322 Gene3D Cytochrome P450 1 320 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04491 322 PRINTS E-class P450 group IV signature 251 267 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04491 322 PRINTS E-class P450 group IV signature 300 318 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04491 322 PRINTS E-class P450 group IV signature 190 216 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04491 322 Pfam Cytochrome P450 2 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04491 322 PANTHER CYTOCHROME P450 26 2 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04491 Seca-Chr12 122306086 122309621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04491 1 320 Cytochrome P450 AT3G19270 73.125 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04491 K09843 - gmx:100806350 578.556