Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04472 ATGAACTTCAAGAACTATGGTGACAACCCCACTTGGGACTCCATGGGTGGGAAGCCACACACAAATGTTACACTGGTGAGGCAGCCTTCAGTATACTCCTTGACTTTTGATGAGTTCCAGAACACCATTGGTGGAATTGGGAAGGATTTTGGGTCCATGAACATGGATGAGCTCTTGAAGAACATATGGACAGCTGAAGAGACTCAGGCTTTGGCATCTTCAGCTGGTGGAGGAGAAGGTCATAACACAAGTGGTAATTTGCAAAGACAAGGTTCTATAACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAAGAATTTGATCAAAGATAATGGTGGAGCTAAAGATGGGAGTGCAAATGGTGGTTCATCTATGCCTCAAAGACAACCAACATTAGGAGAAATAACTCTGGAGGAGTTTTTGGTTAGAGCTGGGGTTGTGAGAGAAGATGTGCCTCAACAAATTGGAAGACCAAATAATAACAATGGATGGTTTGGTGACTTCTCTAGATCGAACAATAACAATGGTCCACTTCTTGGCTTTCAACAACCAAATCGAAATAATGGGAATTTGGGTGACAGGATGGTGGAAGGTAATAATAACTTAGTTCCTAAACACCTTCCTCCTTCATCATTAAACTCAAATCACTCTCAGAGACAAGCACAACAGCACCAGCAGCCACCACCTCTTTTCCCAAAACCAGCAAATGTAGCTTTTGCTGCTCCTATTCATTTGTTAAACAATGCTCAACTTGCTAGCCCTGGCAGAAGGGGAGGGATGATTGGAGTTCCGGAACGTTCAATGAATGGTACATTAGTTCAAAGCAATGCAGTACCTGGTGTTGGAATGCTTGGTTTAGCCACAGCTAATGTCACAGCTCCCTGTGCTTCTCCTGGAAGTAAAATATCACCAGATGTACTTGCAAAGGGTAATATAGATACTTCTTCACTATCACCAGTTCCTTATGTAATCAACAGGGGAAGGAAATGTGGTGCTATAGAGAAAGTTGTAGAGAGGAGACAAAGACGAATGATAAAAAATAGAGAATCAGCTGCAAGGTCACGGGCTCGCAAGCAGGCCTACACTTTCGAACTAGAGGCTGAAGTTGAAAAACTTAAGGAATTAAACAGGGAATTACAAAGAAAACAGGCAGAAATTATGGAAATGCAGAAAAATAAGGATTTGGACACTGCATACGGGCCCGGGGTAAGTAAAAGACAATGCTTGAGAAGGACACTTACAGGTCCTTGGTAG 1266 0.4258 MNFKNYGDNPTWDSMGGKPHTNVTLVRQPSVYSLTFDEFQNTIGGIGKDFGSMNMDELLKNIWTAEETQALASSAGGGEGHNTSGNLQRQGSITLPRTLSQKTVDEVWKNLIKDNGGAKDGSANGGSSMPQRQPTLGEITLEEFLVRAGVVREDVPQQIGRPNNNNGWFGDFSRSNNNNGPLLGFQQPNRNNGNLGDRMVEGNNNLVPKHLPPSSLNSNHSQRQAQQHQQPPPLFPKPANVAFAAPIHLLNNAQLASPGRRGGMIGVPERSMNGTLVQSNAVPGVGMLGLATANVTAPCASPGSKISPDVLAKGNIDTSSLSPVPYVINRGRKCGAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVEKLKELNRELQRKQAEIMEMQKNKDLDTAYGPGVSKRQCLRRTLTGPW. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04472 421 MobiDBLite consensus disorder prediction 158 199 - -
Seca12g04472 421 Gene3D - 341 398 - -
Seca12g04472 421 Coils Coil 362 396 - -
Seca12g04472 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 346 361 IPR004827 GO:0003700|GO:0006355
Seca12g04472 421 MobiDBLite consensus disorder prediction 121 135 - -
Seca12g04472 421 MobiDBLite consensus disorder prediction 156 238 - -
Seca12g04472 421 SUPERFAMILY Leucine zipper domain 343 390 IPR046347 GO:0003700|GO:0006355
Seca12g04472 421 CDD bZIP_plant_BZIP46 343 397 - -
Seca12g04472 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 341 392 IPR004827 GO:0003700|GO:0006355
Seca12g04472 421 MobiDBLite consensus disorder prediction 113 135 - -
Seca12g04472 421 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 341 398 - -
Seca12g04472 421 Pfam bZIP transcription factor 343 395 IPR004827 GO:0003700|GO:0006355
Seca12g04472 421 SMART brlzneu 339 397 IPR004827 GO:0003700|GO:0006355
Seca12g04472 421 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 421 IPR043452 GO:0003700|GO:0045893
Seca12g04472 421 MobiDBLite consensus disorder prediction 208 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04472 Seca-Chr12 121750169 121753978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04472 1 421 bZIP Transcription Factor Family AT4G34000 46.681 1.69e-107 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca12g04472 bZIP_1 1.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04472 K14432 - gmx:100776600 551.977