Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04463 ATGATATGTTCGTCCAAGTGGTTCAGGTGGTTTCCATTAGGGTTTGCAGGGATCAAACGTAGTGATCCTGCCAGTTACACTTGTGTTAACTTTGCCGATGCTCAAGATGTTGTCAAATACTTTGGGAGGAAAGCAAATAGAGACAACAATTTCTACACCGAATGCAGCAGTTCCAGCGGAATACGATTCAACAATGTATCGCTGTATGTTGGGGATCCTAATGGAAATGTGAATGAGACGCAGTTGTATGATATGTTCGTCCAGGTGGTTCAGGTGGTTTCAATTAGGGTTTGCAGGGATCAAACGTAG 309 0.4337 MICSSKWFRWFPLGFAGIKRSDPASYTCVNFADAQDVVKYFGRKANRDNNFYTECSSSSGIRFNNVSLYVGDPNGNVNETQLYDMFVQVVQVVSIRVCRDQT. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04463 102 SUPERFAMILY RNA-binding domain, RBD 50 101 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04463 Seca-Chr12 121533468 121534743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04463 67 100 Eukaryotic Initiation Factors Gene Family AT2G23350 67.647 4.10e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04463 K13126 - csin:114264494 63.929