Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04451 ATGATACACTCACAGTCAATGTGGCATCCCTATGACCCACCCTTGATAATGGCTGGTGATAAAGGATCATCTTCCAATAACAACTACTTGTCCAATATTACTGCAGTAAATGGAACTTCAAACAATAATGGAATACAGCCTGCAGTAGCATTTCAAACATGGACTTTTCCAAATGTGGTATTGAACATTTATGGAGATGTAGCACAATTCTGCATATGTGCAACCAAGAAGCCTGGTATCTTGACCACCATCACTTATGTGCTCAAGAAGTACAACATTGAGGTCCTATCTGCCAACATTTTGTCCAGTAATGGAGATGCATACATGATTCAAGCCCATATGCATATACTTGTAGATATATTATATGCAGGTTTTGATGATGCCAATGGAAAGAAAATGAGTTCACTAAATTGA 414 0.3792 MIHSQSMWHPYDPPLIMAGDKGSSSNNNYLSNITAVNGTSNNNGIQPAVAFQTWTFPNVVLNIYGDVAQFCICATKKPGILTTITYVLKKYNIEVLSANILSSNGDAYMIQAHMHILVDILYAGFDDANGKKMSSLN. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04451 137 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 16 114 IPR044278 GO:0003700|GO:0006355|GO:0009960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04451 Seca-Chr12 120900784 120901363 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04451 47 114 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 49.296 9.14e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04451 - - rcu:8275281 99.3673