Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g04386 | ATGTCCACAGACGAGATCACAAAAATAGAAGAAGGTGGAATTAAGGCACAAAGGGATTCTGGGTGTTGCGGTTCTCCTGGGGTCGTTAGCGTCATACAAAAGGTAATAGCAGAGGTGATAGGGACATACTTCTTAATATTTGCAGGGTGTTCCTCTGTTGTTCTGAATAAAATAGAACAGAGTAAAGGGACAATAACATTTCCAGGAATTTGTGTGGTATGGGGTCTAATAGTGATGGTTTTGGTTTATGCTCTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCAGTAACCGTTAGCTTTGCCATTTATCGTCATTTCCCTCTGAAACAGGTGCCATTGTATATTATTGCACAGGTCCTAGGATCTCTCCTTGCTAGTGGGACATTGTATCTTCTCTATGATGATCTAAATGAAACAACTTATTTTGGAACTGTACCAACAGGATCTGATGTTCAATCCCTTGTCGTTGAGATCCTCACATCATTTCTCTTGATGTTTGTTGTCTCTGCGGTTTCTACAGACAATAGAGCAGTTAGTATATTGAGTCTACTTTTTTTTTTACAGATTGGAGAATTGGCAGGGATTGCTGTTGGGATGACAATCGTAATAGACGTCTTCATTGCTGGGCCTGTATCAGGGGCATCAATGAACCCAGCTAGAAGCCTTGGACCTGCAGTGGTGATGCATATCTACAATGGATTTTGGGTTTATATGGTTGGACCATTTGTTGGTGCAGTACTAGGTGCCTCAGCCTACAACCTTATTAGATTTACTGACAAACCACTTAGAGAACTCAGCGCAAGTTCAAGCTTCTTCAAAAGATCAAGTTTTCGGTAG | 840 | 0.4143 | MSTDEITKIEEGGIKAQRDSGCCGSPGVVSVIQKVIAEVIGTYFLIFAGCSSVVLNKIEQSKGTITFPGICVVWGLIVMVLVYALGHISGAHFNPAVTVSFAIYRHFPLKQVPLYIIAQVLGSLLASGTLYLLYDDLNETTYFGTVPTGSDVQSLVVEILTSFLLMFVVSAVSTDNRAVSILSLLFFLQIGELAGIAVGMTIVIDVFIAGPVSGASMNPARSLGPAVVMHIYNGFWVYMVGPFVGAVLGASAYNLIRFTDKPLRELSASSSFFKRSSFR. | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g04386 | 279 | NCBIfam | MIP family channel protein | 37 | 253 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PRINTS | Major intrinsic protein family signature | 157 | 175 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PRINTS | Major intrinsic protein family signature | 236 | 256 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PRINTS | Major intrinsic protein family signature | 74 | 98 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PRINTS | Major intrinsic protein family signature | 33 | 52 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PRINTS | Major intrinsic protein family signature | 199 | 221 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PRINTS | Major intrinsic protein family signature | 111 | 130 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | PANTHER | AQUAPORIN NIP2-1 | 20 | 271 | IPR034294 | - | |
Seca12g04386 | 279 | Pfam | Major intrinsic protein | 29 | 253 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | ProSitePatterns | MIP family signature. | 92 | 100 | IPR022357 | - | |
Seca12g04386 | 279 | SUPERFAMILY | Aquaporin-like | 30 | 264 | IPR023271 | - | |
Seca12g04386 | 279 | CDD | MIP | 33 | 256 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca12g04386 | 279 | Gene3D | Glycerol uptake facilitator protein. | 11 | 266 | IPR023271 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g04386 | Seca-Chr12 | 119340605 | 119342879 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g04386 | 4 | 274 | Major Intrinsic Protein MIP | AT5G37820 | 59.854 | 7.36e-113 | 326 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g04386 | K09874 | - | gmx:100819179 | 376.326 |