Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04380 ATGGTTTGGGGTGAGAGTGAGATTTTACAAGGAGAAGAAGGGGCTGCTATTGGGGTTGAGTTTAGAGCATTGGTGTCAGAACTCATGGTGTTAATTGGGAAACCAAATATTTCAGATGTTTACCCTGCACTAGCCTGGTTAGATTTACAAGGAATTGAGAGTAAAACAAGAAAAGTCTCACAGTGGATTGATAGGCTTTTTGATTCTGTCATCGAGAAGCGAATGAATGTGACAGAGAACAGAGACACTAAGTCAGAAAAGAAAGATTTCCTGCAATATCTGTTGCAGGTGGAGCTTGAAAACAGTGATAGTCATTCAGCATCAATGACTATGAACGAGATCAAAGCTCTCCTCATAGATATAGTGATTGGTGGGACCGATACCTCATCAACGACATTGGAATGGGTGGTGGCAAGACTGTTGCAGCATCCAGAGGCAATGAAGAGAGTCCATGAAGAGTTGGATGCGGTAATAGGATTGGATAACTGTGTTGAATTAGAATCCCAGTTGTCCAAATTACATTACTTAGAAGCTGTCATAAAGGAAACACTTCGGACCCTGAAATTTGGGAAGAGGGACCCTGAAATTTGGGAAGATGCATTAGAATTTCAACCAGAGAGGTTTCTAAGTGGTGATGCTGGCAAGTGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCTGGAAGAAGAATTTGTGCTGGGCTACCTCTTGCAGAGAAGATGGTAATGTTTATGCTAGCTTCCTTCTTGCATTCCTTTGAGTGGAGATTGCCTAGTGGCACAGTTCTTGAACTTTCAGGGGAAGTTGGCATTGTAATCAAGAAAATGAAGCCACTGATTGCTATTCCAAAACCTAGGCTATCTAAACCAGAACTCTATCAGTGA 885 0.4181 MVWGESEILQGEEGAAIGVEFRALVSELMVLIGKPNISDVYPALAWLDLQGIESKTRKVSQWIDRLFDSVIEKRMNVTENRDTKSEKKDFLQYLLQVELENSDSHSASMTMNEIKALLIDIVIGGTDTSSTTLEWVVARLLQHPEAMKRVHEELDAVIGLDNCVELESQLSKLHYLEAVIKETLRTLKFGKRDPEIWEDALEFQPERFLSGDAGKWGNKFEYLPFGSGRRICAGLPLAEKMVMFMLASFLHSFEWRLPSGTVLELSGEVGIVIKKMKPLIAIPKPRLSKPELYQ. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04380 294 PRINTS P450 superfamily signature 124 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS P450 superfamily signature 232 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS P450 superfamily signature 223 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS P450 superfamily signature 178 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 Gene3D Cytochrome P450 191 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS E-class P450 group I signature 186 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS E-class P450 group I signature 113 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS E-class P450 group I signature 222 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS E-class P450 group I signature 232 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 PRINTS E-class P450 group I signature 133 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 SUPERFAMILY Cytochrome P450 19 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 Pfam Cytochrome P450 192 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 Pfam Cytochrome P450 21 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 Gene3D Cytochrome P450 9 189 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04380 294 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 225 234 IPR017972 GO:0005506|GO:0016705
Seca12g04380 294 PANTHER OS08G0547900 PROTEIN 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04380 Seca-Chr12 118850819 118852440 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04380 1 293 Cytochrome P450 AT4G12320 41.896 7.62e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04380 - - gmx:100785686 453.366