Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04364 ATGGTGCAGTCTTTTGATCATGGATATTATTTATTGGTAAAATCTATCCAAGAACTACGAGAGAAAAAGGAAGGCCTTGTTACAGTTGGCATTGGTGGTCCAAGTGGTTCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCGATGGAGAATTATTGTGATGGGGTTGGCGAAGTGAATGATCTGGATTCTATTGATTTTGCTACCCTGATCAAGAATCTTGAGGATTTGACAAAAGGTGATGATACATTAATTCCAGAGTTTGACTACCAGCAAAAGAGGCGTGTTTGCTATAAAACAATAAAGAGTGCTTCATCTGGGGTGGTAATTGTTGATGGTACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCCTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCCGGATAAACAACAGCTTTGTCTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGGACATTCAGATTCTTCCTTTCAAGGAAATGAAGCCCAAACAGATAATTTTATTGAAATGTACCTTAGACCGCCTTCGGCTAGCGAAGAAGCAAGGATAAATGATTGGATCAAAGTGAGGCAGTCTGGAATTAGGTATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGGCCCAAAGCTGAGTTTGAGGTATGA 843 0.3879 MVQSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYCDGVGEVNDLDSIDFATLIKNLEDLTKGDDTLIPEFDYQQKRRVCYKTIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESSDGHSDSSFQGNEAQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEV. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04364 280 PANTHER URIDINE KINASE 4 214 - -
Seca12g04364 280 Gene3D - 27 207 IPR027417 -
Seca12g04364 280 CDD UMPK_like 28 190 - -
Seca12g04364 280 Pfam Phosphoribulokinase / Uridine kinase family 70 187 IPR006083 GO:0005524|GO:0016301
Seca12g04364 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 142 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04364 Seca-Chr12 118626128 118629637 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04364 28 187 PRT Gene Family AT1G55810 21.788 1.62e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04364 - - gmx:100778905 509.99