Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04359 ATGCATTCCGAATTCGTAGAAATAGCAATGGAAGCGCACCCAGTTGTCCCACCACCCTACAAGAGCACTCTACAGAAGCTGAAGACCAAACTCAAGGAAACTTTTTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAGCCACTTAAGAGAAAAGTGATCCTAGGAGCTCAATATGTGTTCCCTATTCTTCAATGGATTCCTAATTACAGCTTCAAACTCTTTAAATCTGACCTTGTTTCTGGCCTCACCATTGCTAGTTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTTGCAAGTCTTCCTGCAATCTTGGGATTGTATTCTAGTTTTGTTCCCCCACTTATTTACGTTGTTCTTGGAAGCTCAAGGGATCTTGCAGTGGGACCTGTATCTATTGCTTCTCTTGTGATGGGATCCATGCTCACAGAGGAAGTGTCTCCCACAGAAGAACCTCATCTATTTCTTCAGCTTGCTTTTACTTCAACATTCTTTGCTGGTGTCTTTCAAGCTGCTCTTGGAATTCTAAGACTAGGATTTATCATTGATTTTCTATCTAAGGCGACCCTTATTGGGTTCACTGCTGGAGCTGGTATAATTGTTGCTCTACAACAGCTAAAGGGCCTACTTGGAATCAAACATTTCACCAAAAAGATGTCCATCATTCCTGTTATGATGGTCATGGCAAACAATAGTCGTGGGGGTTGCCTTCTTGGGAGTACTACTGATAGCAAGACATATTGTACGTTACTATTATTTTTTCTTCTGCTCTTTCTGCCTGGAAAGATAAAATGTGTGCAGAGCATAAGGAAGCCAAAACTTTTCTGGGTCTCAGCTGGAGCTCCTCTTTTGTCTGTCATAATCTCTACCATCCTGATTTTTGCAATCAAGGGTCAAGATCATGGCATTAGTATAATTGGAAAATTGAAAAAAGGAATAAATCCTTCTTCAGTGCATATGTTGCTCTTTCATGGAACTCATCTAGGTCTAGTCATAAAAACCGGGATTATGACTGGAATTTTATCCCTCACTGAAGGAATTGCAGTGGGAAGGACATTTTCAGCTATCAGAAACTACAAAATTGATGGAAATAAGGAAATGATGGCAATTGGGTTCATGAATATGGTTGGCTGCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCAGCTGTCAATCATAATGCTGGTGCAAAAACAGCAATGTCAAACGCAGTAATGTCTGTGACAGTCATGGTGACACTGCTGTTTCTCATGCCACTATTTCATTACACACCTAATGTTGTATTGGGTGCAATCATAGTCACAGCAGTAATTGGCCTTGTTGATATCCCTGCTGCTTATCACTTATGGAAAATAGACAAATTCGATTTCATTGTGATGTTGGTTGCATTCTTTGGTGTTATTTTTATCTCAGTCCAGTATGGCCTTGCTCTTGCAGTAGGATTATCAATTTTGAGGATCCTCCTGCAAATTACAAGGCCTAAAACAGTGATGTTGGGGAACATACCAGCGACAAACATATATAGAAATCTTCATCATTATAAGGAAGCTGTAAAAGTACCTGGCTTTCTTATTTTAAGTATAGAAGCTCCCATCAACTTTGCAAACATCACATATCTAAATGAGAGGATATTAAGATGGATACAAGAAGAAGAAGATACCATAACAGAAAACTTAGGCCTTCAATTTGTGATTCTGGAAATGTCAGCTGTGAGTTCTATAGACACAAGTGGAGTCACACTTTTCAAGGAGTTGAAAACAACATTAAAAATGAAGGGTTTTGTGTTGGTGAATCCTCTAGCTGAGGTCATTGAAAAGCTGAGAAAAGCAGATGAAGCTAATGATTTCATTCGAGCAGATTTCCTTTTCTTGTCAGTTGGAGAGGCTGTAACTTCACTTTCATCAGCAATGAAGGGCCAATCACCAATCATGGAAGAAGAGACACATGCAACTGTGACTGAGTACTAA 1980 0.4015 MHSEFVEIAMEAHPVVPPPYKSTLQKLKTKLKETFFPDDPLRQFKGQPLKRKVILGAQYVFPILQWIPNYSFKLFKSDLVSGLTIASLAIPQGISYAKLASLPAILGLYSSFVPPLIYVVLGSSRDLAVGPVSIASLVMGSMLTEEVSPTEEPHLFLQLAFTSTFFAGVFQAALGILRLGFIIDFLSKATLIGFTAGAGIIVALQQLKGLLGIKHFTKKMSIIPVMMVMANNSRGGCLLGSTTDSKTYCTLLLFFLLLFLPGKIKCVQSIRKPKLFWVSAGAPLLSVIISTILIFAIKGQDHGISIIGKLKKGINPSSVHMLLFHGTHLGLVIKTGIMTGILSLTEGIAVGRTFSAIRNYKIDGNKEMMAIGFMNMVGCTTSCYVTTGSFSRSAVNHNAGAKTAMSNAVMSVTVMVTLLFLMPLFHYTPNVVLGAIIVTAVIGLVDIPAAYHLWKIDKFDFIVMLVAFFGVIFISVQYGLALAVGLSILRILLQITRPKTVMLGNIPATNIYRNLHHYKEAVKVPGFLILSIEAPINFANITYLNERILRWIQEEEDTITENLGLQFVILEMSAVSSIDTSGVTLFKELKTTLKMKGFVLVNPLAEVIEKLRKADEANDFIRADFLFLSVGEAVTSLSSAMKGQSPIMEEETHATVTEY. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04359 659 Gene3D STAS domain 497 639 IPR036513 -
Seca12g04359 659 CDD STAS_SulP_like_sulfate_transporter 518 630 - -
Seca12g04359 659 Pfam STAS domain 518 633 IPR002645 -
Seca12g04359 659 FunFam Sulfate transporter 31 497 640 - -
Seca12g04359 659 PANTHER SULFATE TRANSPORTER 22 638 IPR001902 GO:0016020|GO:0055085
Seca12g04359 659 SUPERFAMILY SpoIIaa-like 522 637 IPR036513 -
Seca12g04359 659 ProSiteProfiles STAS domain profile. 517 637 IPR002645 -
Seca12g04359 659 Pfam Sulfate permease family 75 466 IPR011547 GO:0016020
Seca12g04359 659 NCBIfam sulfate permease 62 633 IPR001902 GO:0016020|GO:0055085
Seca12g04359 659 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04359 Seca-Chr12 118523689 118529389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04359 7 644 Inorganic Solute Cotransporters AT3G15990 62.150 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04359 K17471 - gmx:100779433 961.829